Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Hr38 (FBgn0014859) TF
 
(2.18/0.73/3.37)

Factor activity

Additional information

Hr38 [FlyBase] | Hr38 [FlyMine] | Hr38 [BDGP]

H. sapiens orthologues1

NR4A3 (HGNC:7982, ENSG00000119508), NR4A2 (HGNC:7981, ENSG00000153234)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGATGCGCGATCGGCTTGCCTCGCTGATTGTGGTGAAGCAAGAGGGCGGCAGCAACACGAGCATTAGCCACCACCAGGCAACGGCCATTAAGTGCGAGGCCTCACTGTACACCGAGAGCAGTTTGTTCCAGGAGATCAACAACAACTCCTGCTACAGACAGAACCTCAATGCCCCGACACACCAGCAGTCACACACATCACACCTGCAACACGCACAGCAGCACCAAACACACCAGCAACATCCCCTCTTGCCGCCGCCTCTGCCGACTCTGCCTTTGATTTACCCCTGCCGCAACCTCTTTCCCGACGGTTGCGATATCAATCACCTGGCCTGCTGCAGTTCCTCCAACTCCAACTCCAACTGCAACTCAGACTCGAACTCCACCTCCAGCTCACCCGGCAACAGCCACTTTTTTGCCAATGGAAACACATGTGCAGCGGCACTAACACCAGCACCGCCAGCCACTGAGCCGAGAAAAATAAAACCACTCGGCGCGGGCAAATTGAAAGTCGGGAAAACTGACAGCAACAGCGACAGCAACAGCAACTGCGACAGCCGAGCAGCAGCAGCTGCCAGCACCTCGGCCACATCCGCAACATCAGCAACGACACTTGCCGCAACAGCAGCAGCAACAGCAGCAGCAGCAGAAGCGGGAGGAGCAGCATCAGCAGCAGCAGCAGCCAAAATCAGCCAAGTGAGGCTTACTAACCAAGCCACAACAAGCATGTTACTTCTGCAACCCAATAGCTCCTTTAGTTCATTGTCGCCCTTCGATAACTTCTCCACGCAAACCGCCTCGACGACCACCACGACGTCGGCATCGGCAGCTGGACACCACCAACACCATAACCACCTCCTCCATCAGCAGCATCACAACCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAACAGCAGCAGCAGCAGCAGCAGGAACATCTGCAACAGCAACACCAGCAACAGCTTGTGAGCCCCCAGCAACACCTGCTTAAGTCGGAGACTCTGCTCTCCCATGAGGAGGATCAGTTGATCAGCAACCTGACAGACTCGTCTGTCGTGTCGCACAGCGAACTCTTCTCGGATCTCTTCTTCCCCTCGGACTCCAACAACTCCCTGCTCTCGCCCACCACCAGCGGCTATCCGGACAATCCCGCCGAGGATCTGACCAGCTCCATTGAGAACCTCACCAAGTTGACGTGCCTGCGGGACAAGCGACTGTCCTCGATCCCCGAGCAGCAGCTCAGTTCCGAGCAGGAGCAGCAGCTCTGCCTGCTCAGCCTGCGTTCCAGCAGCGATCCGGCTATTGCATTGCACGCACAGCAGCAACAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAGCACCAGCAGCAGCAGCAACATCTTCAACTCCAGCTGATCTCGCCCATTGGAGGGCCCCTGTCCTGTGGCAGCAGCTTGCCCAGCTTCCAGGAGACCTACTCCTTGAAGTACAACAGCAGCAGCGGTAGCAGCCCCCAGCAGGCGTCCTCCTCCTCCACCGCCGCCCCCACGCCCACTGACCAGGTGCTGACCCTCAAGATGGACGAGGACTGCTTCCCGCCTCTGTCCGGCGGCTGGAGTGCCAGTCCGCCCGCCCCCTCCCAGCTCCAGCAGCTGCACACCCTGCAGTCTCAGGCCCAGATGTCGCATCCCAACAGCAGCAACAACAGCAGCAACAACGCGGGCAACAGCCACAACAACAGTGGGGGCTACAACTACCACGGCCACTTCAATGCCATCAATGCCAGCGCCAATCTGTCGCCCAGCTCCTCGGCCAGTTCCCTCTACGAATATAATGGTGTTTCCGCAGCGGACAACTTCTACGGACAACAGCAGCAGCAGCAACAGCAAAGCTATCAGCAACATAACTACAACTCGCACAATGGCGAGCGTTACTCGCTGCCCACGTTTCCCACGATTTCGGAGCTGGCTGCGGCCACTGCTGCTGTCGAAGCTGCGGCGGCGGCCACAGTCTCCTCCCCTTCGGTGGGCGGTCCGCCGCCAGTACGCCGAGCATCGCTGCCGGTTCAGCGAACCGTTTCGCCAGCCGGCTCCACGGCGCAGAGCCCCAAGCTGGCCAAGATCACACTGAACCAGCGGCACTCCCATGCCCATGCCCATGCCCTACAGCTCAACTCGGCACCCAATTCGGCGGCAAGTTCGCCAGCGAGTGCGGATCTGCAGGCGGGCCGTTTGCTCCAGGCTCCGTCGCAGCTGTGTGCCGTTTGTGGCGACACCGCCGCCTGCCAGCATTATGGAGTGCGAACCTGCGAGGGATGCAAGGGATTCTTCAAGCGGACCGTGCAGAAGGGCTCCAAGTATGTCTGCCTAGCGGACAAGAATTGCCCGGTGGACAAGAGGCGCCGCAACCGTTGCCAGTTCTGCCGGTTCCAGAAGTGCCTGGTCGTAGGCATGGTCAAGGAAGTGGTGCGCACGGACTCGTTGAAGGGTCGCCGCGGGAGACTGCCCTCAAAACCGAAATCGCCCCAGGAGTCGCCACCATCACCACCCATCTCGTTGATCACGGCCCTGGTTCGCAGCCATGTCGACACGACTCCGGATCCCTCGTGCCTGGACTACAGCCACTATGAGGAGCAGTCGATGAGCGAGGCAGATAAGGTGCAACAGTTTTACCAGCTGCTGACCAGCTCCGTGGACGTGATCAAGCAGTTCGCCGAGAAGATTCCCGGCTACTTCGATCTCCTGCCGGAGGATCAGGAGCTGCTCTTCCAGAGCGCATCGCTGGAACTGTTCGTCCTGCGGCTGGCCTATCGCGCCAGGATCGATGACACCAAGCTGATCTTCTGCAACGGCACGGTGCTCCACCGCACCCAGTGCCTGCGCTCCTTCGGCGAGTGGCTCAACGACATCATGGAGTTCAGCCGCAGCCTGCACAACCTGGAGATCGACATCTCCGCCTTCGCCTGCCTCTGTGCCCTAACCCTGATCACAGAACGCCATGGCCTGCGGGAGCCGAAGAAGGTGGAGCAGCTCCAGATGAAGATCATTGGCAGTCTGCGCGACCACGTCACCTACAATGCCGAGGCCCAGAAGAAGCAGCACTACTTCAGCCGCCTGCTGGGCAAGCTGCCGGAGCTGAGGTCCCTGAGTGTCCAGGGACTGCAGAGGATCTTCTACCTGAAGCTGGAGGACCTGGTGCCCGCGCCAGCTCTCATCGAGAACATGTTCGTCACCACATTGCCCTTC

CDS AA Sequence2

MMRDRLASLIVVKQEGGSNTSISHHQATAIKCEASLYTESSLFQEINNNSCYRQNLNAPTHQQSHTSHLQHAQQHQTHQQHPLLPPPLPTLPLIYPCRNLFPDGCDINHLACCSSSNSNSNCNSDSNSTSSSPGNSHFFANGNTCAAALTPAPPATEPRKIKPLGAGKLKVGKTDSNSDSNSNCDSRAAAAASTSATSATSATTLAATAAATAAAAEAGGAASAAAAAKISQVRLTNQATTSMLLLQPNSSFSSLSPFDNFSTQTASTTTTTSASAAGHHQHHNHLLHQQHHNQQQQQQQQQQQQQQQQQQQEHLQQQHQQQLVSPQQHLLKSETLLSHEEDQLISNLTDSSVVSHSELFSDLFFPSDSNNSLLSPTTSGYPDNPAEDLTSSIENLTKLTCLRDKRLSSIPEQQLSSEQEQQLCLLSLRSSSDPAIALHAQQQQQQQQQQQQQQQQHQQQQQHLQLQLISPIGGPLSCGSSLPSFQETYSLKYNSSSGSSPQQASSSSTAAPTPTDQVLTLKMDEDCFPPLSGGWSASPPAPSQLQQLHTLQSQAQMSHPNSSNNSSNNAGNSHNNSGGYNYHGHFNAINASANLSPSSSASSLYEYNGVSAADNFYGQQQQQQQQSYQQHNYNSHNGERYSLPTFPTISELAAATAAVEAAAAATVSSPSVGGPPPVRRASLPVQRTVSPAGSTAQSPKLAKITLNQRHSHAHAHALQLNSAPNSAASSPASADLQAGRLLQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPDPSCLDYSHYEEQSMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.