Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG5010 (FBgn0260747) cofactor
 
(2.08/0.32/4.46)

Factor activity

Additional information

CG5010 [FlyBase] | CG5010 [FlyMine] | CG5010 [BDGP]

H. sapiens orthologues1

CHCHD2 (HGNC:21645, ENSG00000106153), CHCHD2P9 (HGNC:23676, ENSG00000186940), CHCHD10 (HGNC:15559, ENSG00000250479)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGTTCGCCGTGGACGTTCAGCCAGTCCCCCGCCCTCCACTCGTCGCACCGCACCTGTGCAGGCCCGTGCCCCCGCCCCGGCCCCGGCTCCTGTCCAGACACGTGCCCCAGCACCGGCCGCCTCTGCCCCTGTTCCGGCGCCCATGAGCGCTCCTCCCAGTGCCGTCGGCATGCCGGCACCGCAGCAGCCATCGATGTTCCAGCAGATGGCCGCCACCGCTGGAGGCGTGGCCGTGGGCTCAGCCATTGGACACACCGTGGGTCATGGATTGACCTCGCTGTTCAGCGGATCTGGCGACAAGGAGGCCGCTGCTCCCGCTCCGGCGGCAGCCGCTCCTGCCCCCCAGCAGCCATACTACGCCCAGCAGCAGCAGCCCAATGAGCCGCAGGGAGCCTGCGCCTGGGAGCTCAAACAGTTCATCCAGTGCGCCCAGGGTCAGGCGGATCTTACCCTCTGCGAGGGATTCAACGAGGCGCTGCGGCAGTGCAAGCAGAGCCACCATCTCCAG

CDS AA Sequence2

MVRRGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVGMPAPQQPSMFQQMAATAGGVAVGSAIGHTVGHGLTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADLTLCEGFNEALRQCKQSHHLQ

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.