Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
esc (FBgn0000588) cofactor
 
(-0.27/-1.98/0.30)

Factor activity

Additional information

esc [FlyBase] | esc [FlyMine] | esc [BDGP]

H. sapiens orthologues1

EED (HGNC:3188, ENSG00000074266)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAGCAGTGATAAAGTGAAAAACGGCAACGAGCCCGAGGAGTCGGAGGAATCATGCGGCGATGAGTCGGCCAGCTATACCACCAACAGCACCACCTCGCGCAGCAAGTCCCCGTCATCCAGCACGCGCAGCAAGCGCCGCGGTCGCCGGAGCACCAAATCGAAGCCAAAAAGTCGCGCCGCCTACAAATACGACACCCACGTGAAGGAGAACCACGGAGCCAACATCTTCGGCGTAGCCTTCAACACGCTGCTGGGCAAGGATGAGCCACAGGTCTTCGCTACGGCGGGCAGCAACCGGGTGACCGTCTACGAGTGCCCTCGACAGGGCGGGATGCAGCTGCTCCACTGCTATGCAGATCCGGATCCCGATGAAGTATTTTACACCTGCGCCTGGTCGTACGACCTTAAGACCTCTTCACCTCTCCTGGCCGCTGCTGGATACCGCGGAGTCATCCGGGTTATTGATGTCGAGCAGAATGAGGCGGTGGGCAACTACATTGGCCATGGACAGGCCATTAACGAGCTGAAGTTCCATCCGCACAAGCTACAGCTTTTGCTTTCGGGCAGCAAGGATCACGCGATAAGATTGTGGAACATCCAGAGCCATGTGTGCATTGCCATCCTGGGCGGAGTGGAGGGACATCGCGATGAGGTGCTGTCCATCGACTTTAATATGCGTGGAGATCGCATTGTGTCGAGCGGCATGGATCACTCGCTGAAGCTGTGGTGTCTGAATACGCCCGAGTTCCATCACAAGATCGAACTGTCGAACACTTTCAGCCAGGAGAAGTCAACGCTGCCTTTCCCCACGGTGACCAAGCACTTCCCCGATTTTTCAACGCGGGATATACACAGGAACTATGTGGACTGTGTGCAGTGGTTCGGCAACTTTGTGCTCTCCAAGTCCTGCGAAAATGCCATTGTCTGCTGGAAACCGGGACAACTACATCAGAGCTTCGAGCAGGTGAAGCCGAGCGACTCCTCCTGCACGATAATTGCGGAATTCGAGTACGACGAGTGCGAGATCTGGTTCGTGAGATTCGGCTTCAATCCGTGGCAGAAGGTGATTGCCCTGGGCAATCAGCAGGGCAAGGTGTATGTGTGGGAGCTGGATCCCAGCGATCCCGAGGGCGCACACATGACCACCCTGCACAATTCGCGTAGCGTGGCCACTGTGCGCCAGATAGCCTTCTCTCGCGATGCCAGCGTACTGGTCTACGTGTGCGATGACGCCACCGTGTGGCGATGGAACCGCAGACAAACAACTTCCATC

CDS AA Sequence2

MSSDKVKNGNEPEESEESCGDESASYTTNSTTSRSKSPSSSTRSKRRGRRSTKSKPKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLVYVCDDATVWRWNRRQTTSI

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.