Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
ben (FBgn0000173) cofactor
 
(0.01/-1.93/0.41)

Factor activity

Additional information

ben [FlyBase] | ben [FlyMine] | ben [BDGP]

H. sapiens orthologues1

UBE2N (HGNC:12492, ENSG00000177889), UBE2NL (HGNC:31710, ENSG00000276380)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCCAGCCTGCCACGTCGCATCATCAAGGAGACTCAACGTTTGATGCAGGAGCCAGTGCCTGGGATCAATGCCATTCCCGATGAGAACAATGCCCGTTACTTCCATGTGATCGTGACCGGACCGAACGATTCGCCCTTCGAGGGCGGCGTGTTCAAGCTGGAGCTGTTCCTACCGGAGGACTATCCAATGTCAGCGCCCAAAGTGCGCTTCATCACGAAGATCTACCATCCGAACATCGATCGTTTGGGCCGCATTTGCCTCGACGTGCTGAAGGACAAGTGGAGTCCAGCCCTGCAGATCCGGACCATATTGCTATCCATTCAGGCACTGCTCAGTGCACCCAATCCCGACGATCCGCTGGCCAACGATGTGGCTGAGTTGTGGAAGGTCAACGAGGCGGAGGCCATTCGCAATGCCCGCGAGTGGACCCAGAAATATGCCGTCGAAGAC

CDS AA Sequence2

MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAVED

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.