Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
sc (FBgn0004170) TF
 
(3.20/1.36/5.45)

Factor activity

Additional information

sc [FlyBase] | sc [FlyMine] | sc [BDGP]

H. sapiens orthologues1

ASCL1 (HGNC:738, ENSG00000139352), ASCL2 (HGNC:739, ENSG00000183734)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAAAAATAATAATAATACAACGAAAAGCACTACCATGTCATCGAGTGTGCTGTCCACCAACGAAACGTTTCCAACGACCATCAATTCGGCAACGAAGATCTTTCGTTATCAGCACATAATGCCAGCCCCTAGTCCATTAATTCCCGGTGGCAATCAAAATCAACCCGCTGGCACAATGCCAATTAAGACTCGCAAGTATACACCAAGGGGTATGGCACTGACCAGATGCTCTGAATCAGTATCATCTCTATCGCCTGGTTCCTCGCCGGCTCCATATAATGTAGACCAATCCCAGTCGGTCCAAAGGCGCAATGCTAGAGAACGAAATCGTGTAAAGCAGGTGAACAACAGCTTCGCCAGGTTGCGGCAACATATACCACAATCCATAATCACGGATTTGACAAAGGGTGGTGGTCGAGGACCTCACAAAAAGATCTCCAAAGTAGACACACTGCGCATTGCCGTCGAGTACATCCGGAGGCTTCAGGATCTGGTGGATGACCTAAATGGGGGCAGCAATATTGGTGCCAACAATGCAGTCACCCAGCTTCAACTTTGTTTGGATGAGTCCAGCAGTCACAGTTCGAGCAGCAGTACTTGCAGTTCCTCAGGGCATAATACCTACTATCAAAACACGATCTCTGTCAGTCCTCTGCAACAACAGCAGCAGCTACAGAGGCAGCAGTTCAATCACCAACCGCTGACAGCGCTCTCATTAAATACCAACTTGGTGGGCACATCCGTACCAGGTGGAGATGCAGGATGCGTATCCACCAGCAAAAACCAGCAAACCTGCCACTCGCCAACATCATCATTCAACTCCAGCATGTCCTTTGATTCAGGCACCTACGAAGGAGTTCCCCAACAAATATCCACCCACCTGGATCGTCTGGATCATCTGGACAACGAATTACACACGCACTCCCAACTTCAGCTAAAATTTGAACCGTACGAACATTTTCAATTAGACGAGGAGGACTGCACCCCCGACGACGAGGAGATTTTGGACTACATCTCTCTATGGCAGGAGCAG

CDS AA Sequence2

MKNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQFNHQPLTALSLNTNLVGTSVPGGDAGCVSTSKNQQTCHSPTSSFNSSMSFDSGTYEGVPQQISTHLDRLDHLDNELHTHSQLQLKFEPYEHFQLDEEDCTPDDEEILDYISLWQEQ

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.