Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
trem (FBgn0038767) TF
 
(-0.38/-3.15/0.58)

Factor activity

Additional information

trem [FlyBase] | trem [FlyMine] | trem [BDGP]

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAAAACTGAGTCCAACGAGAAGTGGGTGGTGTGCCGCGTTTGCCTGAACAATCCCAGCGAGGGCGAGGAGCTGCTCCACGACATATTCAGCGAAACGGCAAGCACGCGACTGGACCAAATGCTGCACATTTGCGCAGGCATTCCAGTCAGCCTAGATGACAACTTCCCGGACAAGATGTGCAGCAAGTGCGTGCGCTGCCTGCGGCTCTGCTACAAGTTCCGTCTGACATGCCAGCGATCCCATCAGCACATTATGGACATGCTGGACCGGGAGGCCAGCAATGCTAACGCCGCCGGCGAAGGGGATTTGCTTAGCATCGCGGAGGACCTTTCGGTGGAGAGCGTACTGAAGTCGTGGGAGGACTACGCCAGTCAGCTGGATGGCGGCATGAAAGTGGAGGGCGAGGAGGATCAGCAACATCAGGTTATCACCTATGTCGTGGAGGATGGTGATACTGATGATACCAATATGTTCGATGTGCACGATCCCACGCAGCCGGTGCCAAATGAGATCGAGGAGGCTGAAACCTATGCTGAATACGAGGAATACGAACTGCTCACCAACGAAAACTCGCCGGAAATCGCACAGGAAAAAGGCTCCACCGGCACAGATGTTGCCACAGAGGAGCCGCCCGAAGAAGAAATTGCTGAAGACATACTCGACTCTGACGAAGATTATGACCCAACTCATGCTAAGCCGGAAAAATGCGACCGATCGGGCAGGAAGCCAGTTGCATACCACAAGAATAGCCCAAAAGTGGAAACCTTCAAAAAGAAGGTGGGCAGAAAGCCGCGCAACAAGCTGAGCACATACATCTGCGATGTGTGCGGAAATATCTATCCGACTCAGGCGCGTCTCACCGAGCACATGAAATTCCATTCTGGTGTTAAACCACACGAGTGCGAGATCTGCGGAAGAGGCTTTGTGCAGAATCAACAGCTGGTACGGCACATGAACACTCACACGGGGAACCGACCATACAAGTGCAACTACTGTCCAGCTGCCTTCGCCGATCGATCCACGAAAACCAAACATCATAGAATTCACACTAAGGAGCGTCCCTACGTGTGCGACGTTTGCTCCAGAACGTTTACCTACTCGGACAACCTGAAGTTCCACAAGATGATTCACACGGGGGAGAAGCCGCATGTCTGTGATCTTTGTGGCAAAGGATTTGTGAAGGCCTACAAATTGCGTTTGCATCGGGAAACGCATAATAGACGTATCACCTGGAGAAATGACGCAGAAGAGAGCACCAAAGCAGAAGATGTCAAGGGGGAAACGCCGGAGTTTCTCAATGAACTCCCCAAAGAG

CDS AA Sequence2

MKTESNEKWVVCRVCLNNPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCVRCLRLCYKFRLTCQRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWEDYASQLDGGMKVEGEEDQQHQVITYVVEDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELLTNENSPEIAQEKGSTGTDVATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLSTYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPAAFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLRLHRETHNRRITWRNDAEESTKAEDVKGETPEFLNELPKE

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.