Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Nf-YC (FBgn0029905) TF
 
(-0.21/-1.23/0.40)

Factor activity

Additional information

Nf-YC [FlyBase] | Nf-YC [FlyMine] | Nf-YC [BDGP]

H. sapiens orthologues1

NFYC (HGNC:7806, ENSG00000066136)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTACGCCACCAACAATGGCGGCACGAACAAGGCGCCAAACAGCAATGCCACCTCCATGTTCGACAACACCATCACAGTGACGCCCATAAAGATGGAACTGGGCCAGGCGTATGCCAAATCGCAAAATTCAGCGGCTATGCAGCGAAGAACACCGAATGCAGTGGTGGTCACCTCCTCCTCCACCGTCTCCTCCGCCCAGCAGCAGCAGCAACAGCAGGGCCAGCAGCAACAGCAGACGGTTCCCATGGCCAGTTTGGTGTCCAACGCCTGTACGCTGGTTAATCCCAGCATGAGTGTGACGGTGGCCACCACCGTTGCGAGCGGCGCCAAGGAGAAGACCACGAAGGCCACACGAACTCAGGTGGCACGCAAACCGCCGCCCACCATCGACAACTTCTGGCCAAATATCGTGAGCGAGGTGCACAGCATCGGCCAGGTGGATGCCAAGCACCAGGTGCTGCCGCTGGCGCGCATCAAGAAAATCATGAAGCTGGACGAGAACGCCAAGATGATTGCCGGCGAGGCGCCGCTACTGTTTGCCAAAGCCTGCGAGTACTTCATTCAGGAGCTGACTATGCACGCTTGGGTGCACACCGAGGAGAGCCGGCGGCGTACGCTCCAGCGTTCGGACATTGCCCAGGCCATAGCCAACTACGACCAGTTCGACTTCCTCATCGACATTGTGCCGCGCGAAGAGATCAAACCGTCGTCGGCGCAAAAGACCAAGGATGGCAGTACATCCAGTTCGAGCGGAATGGCGGGCGCAGCCAGCAGTGCCGCCTCCACCTCCAACACAGCCACCTCCAATGCGGCCGCCTCCGTGGCGGGCAATGCTACCGCCACGGGCAACTTTGTAGCCAGTGGTTCCACCGTACCTGCGACCACCGCTGGTGGCCTCAAGCTGGACACCACGGGTGCAACCAATGCCGCCGAGGTGCTCGGCTTCAGCACTGTCAACTCGGACATCTTCTCAGCGCAACTGCAGCAGCAACAACAACAGCAGCAACAGCACGCCGCCCAGCAGCAGCAGCAACAACAGCAGCAGCAACATCACCAGGCACATCCACAGCAGGTTCAGATTATTCAGCAGGGCGCTGGTGGCCAACAGTTGCAATACTTTATCGCACTGCCGAGTCAGCAGGCGGCGCAGCTCGTGCAGCAGCCGCAGCCCGCGCAGAATCATCTACCCATCAACATTTTGTCAACCCAACAACCCACCCAGCAGTTGATACTGACCGCCGGTCCCAATGGTCAGCTGACCGCAACGCCAGCGCCGCAAACGACTGCCCAGCAACAGACGGCGCTGCTCCAGAATCTCGCCCAGCAGCAACAGCAGCACCAGCAACATCAGCAGCAGATTCAGCTGCTGCAGCAAGTGGTTACGCCCACGGGGGAGCTGACTAATGTGCCGATCGCCATCAATGCCAGTCATTTGAATCTCCTGCAGCGACTACAAATGCAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAACAACAGGTCATCATACCAACCCAACTGCTGACGACACAGCAACTGCTCCAGCTGGGCGGAGCACCCACAGTGGCCCATCAGCAGCAGCAGCAACAGCAGCAGCACGCCAATCTCACGCAGCAGAGCAACGCCAGTGCGGTGGCCAGTGGCACGCCGATCTTTATCAACTCGACCATGACTGGTGCCCAGGCGGCGGCGACGCAGGCGCAGCAGCAGCAGTCGGCGCAGCAGCAACAGGCACAAACGATCTCCACCATGTCCACGGATCGCACATTAACCGGCGGATTTCGG

CDS AA Sequence2

MYATNNGGTNKAPNSNATSMFDNTITVTPIKMELGQAYAKSQNSAAMQRRTPNAVVVTSSSTVSSAQQQQQQQGQQQQQTVPMASLVSNACTLVNPSMSVTVATTVASGAKEKTTKATRTQVARKPPPTIDNFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSGMAGAASSAASTSNTATSNAAASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAAEVLGFSTVNSDIFSAQLQQQQQQQQQHAAQQQQQQQQQQHHQAHPQQVQIIQQGAGGQQLQYFIALPSQQAAQLVQQPQPAQNHLPINILSTQQPTQQLILTAGPNGQLTATPAPQTTAQQQTALLQNLAQQQQQHQQHQQQIQLLQQVVTPTGELTNVPIAINASHLNLLQRLQMQQQQQQQQQQQQQQQQQQQVIIPTQLLTTQQLLQLGGAPTVAHQQQQQQQQHANLTQQSNASAVASGTPIFINSTMTGAQAAATQAQQQQSAQQQQAQTISTMSTDRTLTGGFR

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.