Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Rel (FBgn0014018) TF
 
(-0.94/-2.71/-0.33)

Factor activity

Additional information

Rel [FlyBase] | Rel [FlyMine] | Rel [BDGP]

H. sapiens orthologues1

NFKB2 (HGNC:7795, ENSG00000077150), NFKB1 (HGNC:7794, ENSG00000109320)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAACATGAATCAGTACTACGACCTGGACAATGGGAAAAATGTGATGTTTATGAACGATGCATCCAGCACCAGTGGCTATAGCAGCAGTACATCACCCAACTCCACCAACCGATCCTTTTCACCAGCCCACTCCCCGAAAACCATGGAACTGCAAACGGACTTCGCCAATCTTAATTTGCCCGGCGGCAATTCACCACACCAGCCGCCAATGGCAAACTCACCATACCAGAATCAGCTGTTGAACAACGGCGGAATTTGCCAATTGGGTGCTACCAATTTAATAAACTCCACTGGCGTTAGTTTCGGCGTTGCTAATGTCACCAGTTTTGGCAACATGTACATGGATCACCAGTACTTTGTGCCCGCTCCGGCCACTGTGCCACCGTCCCAAAACTTTGGATACCATCAAAATGGCCTGGCATCTGACGGCGATATCAAACACGTGCCGCAGCTGCGGATCGTTGAGCAACCGGTGGAGAAGTTCCGCTTTCGGTACAAGAGCGAGATGCATGGAACACATGGATCGCTAAATGGCGCCAATTCGAAGCGGACGCCCAAAACCTTCCCGGAGGTTACACTGTGCAACTACGATGGACCCGCCGTCATCCGGTGCAGTTTGTTCCAAACTAACTTGGACAGCCCACATTCCCATCAGCTGGTCGTGCGCAAGGACGATCGGGATGTGTGCGATCCGCATGATTTGCACGTGTCCAAGGAGCGCGGCTATGTGGCGCAATTTATCAACATGGGCATCATACACACCGCCAAGAAGTACATATTCGAGGAACTGTGCAAGAAGAAGCAGGATCGCCTGGTCTTTCAGATGAACCGCCGCGAGTTGTCCCACAAACAGCTACAGGAACTGCATCAGGAGACAGAGCGTGAGGCCAAGGACATGAACTTGAACCAGGTGCGGCTCTGCTTTGAGGCCTTTAAAATTGAGGACAACGGCGCATGGGTTCCACTTGCACCGCCTGTATACAGCAATGCAATCAATAACCGCAAGTCGGCACAAACTGGAGAGCTTCGCATCGTCCGCCTGAGCAAACCCACTGGCGGGGTGATGGGCAACGATGAGCTTATTCTACTGGTGGAAAAGGTCAGCAAGAAGAACATTAAAGTGAGGTTCTTCGAGGAGGATGAGGACGGGGAAACCGTGTGGGAGGCATACGCAAAGTTCCGCGAATCGGATGTACACCACCAATATGCCATTGTGTGCCAGACGCCTCCGTACAAAGATAAGGACGTGGACCGCGAGGTCAACGTGTACATCGAGCTCATTCGTCCCTCCGACGATGAGCGCTCATTCCCGGCGCTGCCCTTCCGCTACAAGCCACGGAGCGTAATTGTGTCGAGGAAACGCCGACGAACCGGGTCCTCTGCCAATAGCAGCAGTTCGGGAACAGAAAGCTCTAATAACTCGCTGGATCTGCCCAAAACGCTGGGCTTGGCGCAGCCACCAAATGGCTTGCCAAACCTTTCACAGCATGATCAGACTATAAGTGAGGAGTTCGGACGCGAAAAGCATCTAAATGAATTTATTGCTTCCGAAGATTTCCGCAAACTTATCGAGCACAACTCTTCTGATCTCGAGAAGATCTGCCAGTTAGACATGGGAGAGTTGCAGCACGATGGTCATAACCGGGCGGAAGTGCCATCGCATCGAAATCGTACAATTAAATGCTTGGATGACTTATTCGAAATTTACAAACAGGACCGCATATCGCCAATAAAAATCTCGCACCACAAAGTGGAGAAGTGGTTTATCGAGCATGCTCTGAATAACTACAATAGAGACACGCTCCTGCACGAAGTGATCAGCCACAAAAAGGACAAACTGAAGCTGGCCATCCAGACGATACAGGTGATGAACTACTTCAATCTGAAAGATGTGGTCAATAGCACTTTGAATGCGGACGGTGATAGTGCCCTGCATGTGGCGTGCCAGCAAGACCGAGCGCACTACATACGACCTTTGCTGGGTATGGGATGCAATCCAAATCTGAAGAATAATGCCGGAAATACCCCACTGCATGTGGCCGTCAAGGAGGAGCACTTAAGCTGCGTGGAAAGCTTCCTTAATGGAGTGCCAACCGTACAATTGGACCTCTCGCTAACGAACGACGATGGTCTGACGCCTTTGCACATGGCCATTCGACAGAACAAGTACGATGTGGCCAAGAAACTGATCAGCTATGATCGGACCTCGATTAGCGTGGCCAACACAATGGATGGTAATAATGCACTCCACATGGCAGTTCTGGAGCAAAGTGTGGAGCTATTGGTGCTCATTCTGGATGCCCAAAATGAAAACCTTACCGACATCCTGCAGGCACAAAATGCAGCCGGCCATACTCCCTTGGAATTGGCCGAACGCAAGGCAAATGACCGGGTGGTCCAGCTGCTGAAGAATGTGTATCCGGAGAAGGGAGAACTGGCCATGACCTGGATTCCATGTAAGGTCAAGGAGGAGATCGATTCATCGTCGGACGAAAGTAGCGATGCTGGTCAGCTGGAGATCAAGTCCGAGGAGATGGACATCGAAACAAAGGACGAGGATTCCGTGGAGTTGGACCTAAGTAGTGGTCCAAGAAGACAGAAAGATGAATCCAGTAGAGACACCGAAATGGACAACAACAAATTGCAGTTGCTGCTCAAAAACAAATTCATTTACGACCGGCTCTGTTCGCTGCTGAATCAGCCTTTGGGACATGGGTCCGATCCCCAAGATCGGAAATGGATGCAACTAGCCCGCCAGACGCATCTGAAGCAGTTCGCCTTTATATGGCTGGGCGCGGAGGATCTGTTGGATCACGTGAAAAGAAAAGGAGCCTCTGTAGAGTTTTCCACATTTGCTCGTGCCCTGCAGGCAGTGGATCCACAGGCTTACGCCCTACTGGTTAACCCAACT

CDS AA Sequence2

MNMNQYYDLDNGKNVMFMNDASSTSGYSSSTSPNSTNRSFSPAHSPKTMELQTDFANLNLPGGNSPHQPPMANSPYQNQLLNNGGICQLGATNLINSTGVSFGVANVTSFGNMYMDHQYFVPAPATVPPSQNFGYHQNGLASDGDIKHVPQLRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKDDRDVCDPHDLHVSKERGYVAQFINMGIIHTAKKYIFEELCKKKQDRLVFQMNRRELSHKQLQELHQETEREAKDMNLNQVRLCFEAFKIEDNGAWVPLAPPVYSNAINNRKSAQTGELRIVRLSKPTGGVMGNDELILLVEKVSKKNIKVRFFEEDEDGETVWEAYAKFRESDVHHQYAIVCQTPPYKDKDVDREVNVYIELIRPSDDERSFPALPFRYKPRSVIVSRKRRRTGSSANSSSSGTESSNNSLDLPKTLGLAQPPNGLPNLSQHDQTISEEFGREKHLNEFIASEDFRKLIEHNSSDLEKICQLDMGELQHDGHNRAEVPSHRNRTIKCLDDLFEIYKQDRISPIKISHHKVEKWFIEHALNNYNRDTLLHEVISHKKDKLKLAIQTIQVMNYFNLKDVVNSTLNADGDSALHVACQQDRAHYIRPLLGMGCNPNLKNNAGNTPLHVAVKEEHLSCVESFLNGVPTVQLDLSLTNDDGLTPLHMAIRQNKYDVAKKLISYDRTSISVANTMDGNNALHMAVLEQSVELLVLILDAQNENLTDILQAQNAAGHTPLELAERKANDRVVQLLKNVYPEKGELAMTWIPCKVKEEIDSSSDESSDAGQLEIKSEEMDIETKDEDSVELDLSSGPRRQKDESSRDTEMDNNKLQLLLKNKFIYDRLCSLLNQPLGHGSDPQDRKWMQLARQTHLKQFAFIWLGAEDLLDHVKRKGASVEFSTFARALQAVDPQAYALLVNPT

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.