Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
cbt (FBgn0043364) TF
 
(-1.26/-4.08/0.17)

Factor activity

Additional information

cbt [FlyBase] | cbt [FlyMine] | cbt [BDGP]

H. sapiens orthologues1

KLF12 (HGNC:6346, ENSG00000118922), KLF8 (HGNC:6351, ENSG00000102349), KLF3 (HGNC:16516, ENSG00000109787), KLF4 (HGNC:6348, ENSG00000136826)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAGCATGACACCGCCGCCGGATCAAAAGCTGGACGATGATCAGAAAGCGGAAAGGGTTAGCGTCATCATGCGGGTCAACAGTTCTGGCGCTGTCTCTTCTAGTAGCCAAGACGAGAACTCATCTAGTTCCACCTCCTGCTGTAGTTCCTCTTCCAACACAAACACAAGTACAAGTTCAGTACCACCCACTGTGGAGGACGACTATCCAGAGGCCAATGTGTGGCGCAATCTCAAGTTCAAAATGAACAGAAAGCGTGCTGCAGAAGTGGCACTACCCCCAGTACAAACACCCGAGACACCAGTTGCGAAGCTTGTAACGCCACCTGCTCCAGCGGAATGCATCAAGGAGGAGGAAATAAAACCTATTCTGACACCGATATATGTTAGCCCAGTAGCTTCGTCTGCCAGCCAACTTATCCTGCTCAGCACAGTGGCCGCCCAACAGAGCCCCACACCCGTACCCAAAACGCCAACAATGTCCGAGGAGAAACTAACAACCAGAATTACGGCCGCCCAGGCGGCGGCCACCAGAAGTCGCATCTACGAGTGCAGTTTTCCCGATTGCGGCAAGAATTACTTCAAAAGCAGTCATCTGAAGGCCCACCAGAGGGTTCACACCGGCGAGCGACCCTTTATCTGCAAGTGGGAGAACTGTGACAAACGATTCTCCCGTTCCGATGAGTTGTCCCGACACAAACGGACCCACACCGGTGAAAAGAAATTCCAGTGCAGCGTCTGCCAGAAGAAATTCATGAGAAGCGATCACCTGTCGAAGCACGTCAAACGGCACAACAAGGACAAGGCGAACGGAGTGAATCGACATGTCTCCCTGGCCAACAACAACACATCAGCTTCGGTAGCGGCTTCCCTCTGCGATGCCTCGCTCCATTTGCGAGCGATAGCACCGGCGGGCTCCAGCGCTAGTTCCTCGCCCATCAGTTCCGCCAGCTTGCAAGTCTACAGCGCCCAAGATCTGCTGAGGCTACAGCAGCAGGCCAGCAGTTTCACCTTCGGCGGAACCCTGCTTCAAGTGCAGCGA

CDS AA Sequence2

MSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRHVSLANNNTSASVAASLCDASLHLRAIAPAGSSASSSPISSASLQVYSAQDLLRLQQQASSFTFGGTLLQVQR

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.