Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
mirr (FBgn0014343) TF
 
(-1.28/-4.38/-0.14)

Factor activity

Additional information

mirr [FlyBase] | mirr [FlyMine] | mirr [BDGP]

H. sapiens orthologues1

IRX4 (HGNC:6129, ENSG00000113430), IRX6 (HGNC:14675, ENSG00000159387)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGACAGTGCACAGTAATGAAACCGGTATCTGTTTAGTAATGAATGCCGTTTCAACTCACCTTGCCACCTCGTCGCCCAACACGCCTCCAACCAACGCTCCGCAGAGTCCGCCCTCGACGCTGCCCACGCTCGCCTGTCCCGCCGCCCAGCCGCTGAGTGCACCGGGAATCGCCGGGCCAGGACACAGTGGCATGGTGACCTCGACGGTGCCGCCGGGCGCTCGCTCCACCTCGCCGTGCGGTCCGTCCGCCGGCCTGCCCGCCCTCTCGCTGGTGGGCGCACCGCCACCGGGACCGCACTCCTCCGCCCCCGGTGGAGCACCGGCGCCCGGAGCGGGCAACCCGCCCAACCGCTGCTGTGATACGGGTCGCACCATCTACACGGATCCGGTGAGCGGCCAGACGATCTGCTCCTGCCAGTACGACATGCTCAACTACCAGCGACTAGCCGCCGCCGGCGGAGTCCCGCTCGGCGTCTATCCGGAGGGCATGTCCGCCTACCTCTCCGGGATTGCGGCGGATCAGCCGCCGTTCTACGCCAATCCGGCTGGCATCGATCTGAAGGAGAACCTGGTGGCCGGAGCATCGCCCTGGCCATATCCATCCATGTATCATCCATACGACGCGGCCTTCGCCGGCTATCCGTTCAACAGCTATGGCATGGATTTGAATGGGGCCAGAAGGAAGAACGCCACCCGCGAGACCACATCCACGTTAAAGGCCTGGCTAAATGAGCACAAGAAGAACCCGTATCCCACCAAGGGCGAGAAAATAATGCTGGCCATTATCACCAAGATGACGCTGACGCAGGTGTCCACGTGGTTCGCCAACGCGAGAAGAAGACTGAAAAAGGAGAACAAGATGACCTGGGAGCCCAGGAATCGCGTCGACGACGATGATGCCAATATCGACGATGACGATGATAAGAACACCGAGGATAACGATCTGTTAGACGCCAAGGACTCCGGCGTTGGTTCCACGGACGACAAGGACCGTTCCGGTCGCCTTGGCGACATGATGACCGACCGTCCCGGCGAAAGCAACAACAGCGAGTGGTCCGAGTCCCGGCCCGGATCGCCCAATGGATCACCGGACCTATACGACCGACCCGGCAGCATGCCGCCGGGCGCCCACCCACTCTTCCATCCCGCCGCCCTGCATCACCACTTCCGGCCACCGGCGGGTTCCCCGCCAGACATCGCCGCCTACCATCACCACCAACAGCAGCTGCTGCAGCAGCACCAGCAGGCGCAGCAGAACTCGCTGCAGACCGCAGTGGGGGGCACCGCGAAGCCAAGGATCTGGTCGCTGGCCGACATGGCCTCCAAGGATAGCAAGGATTCCAGCTCCGGCGCCAAGGATAACCACCCAGAGCTACCGCCTGCGCATCCCGGCTTCTATGGACACCCCGGCCAACAGCCCTCACCCGGCAAGATTCTATCGCCCCTCGCAGCAAGAATTCCCAACTATTCACCCTACGTCCGCCCGGATTTATATCGTGGCTTCTACGGACCAGCTGCAGCGCATCTGGGTGCTCCCACGCAGGAATTCCTCGAGCATCAGCGCACATTCGGTGCCAGCTTGGCGGCCCACAATGGACCGCTGGGCATGAATCCGTTGCTGTGGAAGGCGGCCGTATCCGGAGCCGCCAATGGACACCACTTTGCACCGCTCAGTCTGACCACCTCGGGTGGATCGAGTGGAGGACAGCAGGTGGCACCGCCGCCAGTTGCCTCGCCCTCCGCCTCCAGTTCGTCCTCGTCGATGGGCTGCGATGTGGTGCACATACCCACGAGCAGTGGACAATCGGCTGCGCAGCACATGATGGGACCAATATCCAGCAACTCCACCGCCTCGTCATCCAGTTCGCACTCCGGCAAGATATCGCCCGGCGTGAATGTGACCTCGCTGAGTGCAAAGCCA

CDS AA Sequence2

MTVHSNETGICLVMNAVSTHLATSSPNTPPTNAPQSPPSTLPTLACPAAQPLSAPGIAGPGHSGMVTSTVPPGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAPGAGNPPNRCCDTGRTIYTDPVSGQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSAYLSGIAADQPPFYANPAGIDLKENLVAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDDANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRLGDMMTDRPGESNNSEWSESRPGSPNGSPDLYDRPGSMPPGAHPLFHPAALHHHFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQNSLQTAVGGTAKPRIWSLADMASKDSKDSSSGAKDNHPELPPAHPGFYGHPGQQPSPGKILSPLAARIPNYSPYVRPDLYRGFYGPAAAHLGAPTQEFLEHQRTFGASLAAHNGPLGMNPLLWKAAVSGAANGHHFAPLSLTTSGGSSGGQQVAPPPVASPSASSSSSSMGCDVVHIPTSSGQSAAQHMMGPISSNSTASSSSSHSGKISPGVNVTSLSAKP

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.