Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
l(2)09851 (FBgn0022288) cofactor
 
(-0.11/-0.92/1.13)

Factor activity

H. sapiens orthologues1

GRWD1 (HGNC:21270, ENSG00000105447)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGATGATGGAAATGAAAACATTAGTATGGAAGTGGTGGAGCCCGAAGACGCCGAGAGCGACATGAGCTCTGACAGTGGTAGTGACGCAGAAGACGATACCGCTGAGCCCAAAGCCCCCAAAGAGGTCTACTTGCCCGGAACCAAACTCGCAGACGATGAGGAGCTGGTCTGCGATGAGAGTGCGTACGTGATGCTGCACCAAGCTTCTACGGGAGCTCCCTGCCTGAGCTTTGATGTCATTCCCGACGAGTTGGGCAGCGGACGGCAGTCGTTCCCGATGACGGCTTATATTGTGGCCGGCACGCAAGCTTCCCGCGCCCATGTCAACAACCTTATTGTGATGAAAATGAGCAACCTGCACAAGACGCAGGACAATGACGGCGACGAAGACGAGGAGCTAGAAGACGACCAAGACGACGTGACTGACAGGGAGGAGCTCAAAAAGCCGCAGATGACATGCGCCCTTGTCAAGCACCAAGGGTGCGTTAATCGCGTCCGTGCCCGCCGATTGGGCAATTCGGTCTACGCTGCCTCCTGGAGCGAACTTGGTCGTGTGAACATTTGGGACCTAACTCAGCCATTGCAGGCCGTGGAGAACGCTCAGTTGGCCAAGCAGTACGAGCAAAGCGAAGCGCGTCCAGTGTTTACTTTTGGTGGCCATCAGCAGGAGGGCTTCGCCATCGACTGGAGTCCCAGTGCAGATGGTGTACTGGCGACAGGGGACTGCCGGCGAGACATACACGTGTGGACTCCGGTAGAAGACGGCACATGGAAAGTTGATCAACGTCCCCTAGCGGGCCACTCACAGTCAGTTGAAGATCTGCAATGGAGTCCAAACGAACGTAGCGTTCTCGCGTCCTGTTCGGTGGACAAAACCATCCGAATTTGGGACTGCCGCGCCTCGCCTCAGAAAGCATGTATGCTGACATGCGAGGACGCACACCAGAGCGACGTAAACGTGATTTCGTGGAATCGCAACGAGCCTTTTATCGCCAGTGGCGGCGACGACGGCTACCTCCACATCTGGGACCTACGTCAGTTTCAGAGCAAAAAGCCGATTGCCACTTTTAAGCACCACACGGACCACATCACTACTGTCGAATGGAGTCCCGCAGAGGCTACCGTACTGGCGTCAGGCGGTGACGATGACCAAATTGCTTTGTGGGATTTGGCTGTAGAGAAGGACATCGATCAGGCGGTGGACCCGGCGCAAAACGAAGATGTCCTAAACAAGTTGCCACCGCAATTGCTTTTTATTCACCAGGGACAAAAGGAGATTAAAGAGCTACACTGGCACCCTCAACTGCCGGGCGTTCTACTTTCTACAGCCCACAGTGGCTTTAATATCTTTCGCACGATCAGTGTC

CDS AA Sequence2

MDDGNENISMEVVEPEDAESDMSSDSGSDAEDDTAEPKAPKEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTISV

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.