Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Parp (FBgn0010247) cofactor
 
(-0.94/-3.90/-0.14)

Factor activity

Additional information

Parp [FlyBase] | Parp [FlyMine] | Parp [BDGP]

H. sapiens orthologues1

PARP1 (HGNC:270, ENSG00000143799)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGATATTGAATTACCTTATCTTGCTGAGTATGCAAGAACTGGACGAGCCACTTGCAAAGGATGTAAAAGTACTATATCTAAAGATAATCTTCGGATTGCTGTCATGGTTCAATCTGCATTTCATGATGCCAAAGTTCCGAATTGGTTTCATAAAACCTGCTTTTTTAAAAACCAGCGTCCCAGCTCAGTAGGAGACATACAAAACATTGGAAATCTCCGATTTGCCGATCAAAAGGAATTAACGGATCTTGTGGAAAATATACAAGAAGTTATAAGCGCACAATTAGGAAAAAAGCGATCGAAGGCTTTTAACTTAGCATTAAAAGACTTTGGGATTGAATATGCAAAATCTAGTCGATCGACGTGTCGTGGATGTGAACAAAAAATAAACAAGGATCTAGTTCGCTTACGTAAAACTGTTTATGATACTGAAGTTGGTATGAAGTACGGAGGCCAACCTTTGTGGCATCATTTGGAATGCTTCGCCCAATTGCGCTCTGAGCTTGGCTGGTTTGCGTCAGGTGAAGATATGCCAGGATTTCAGAGCTTAGCAGATGATGATCAAGCGAAAGTTAAAAACGCCATACCACCAATAAAATCTGAAGAACTACCAGATACAAAAAGAGCTAAGATGGAATTATCAGATACAAATGAAGAAGGAGAAAAGAAACAACGCTTAAAAGATCAAAATGATGCCTACTTCAGGTTTCGCGATGACATTAAAAATAAAATGAAGAAGAAAGACATTGATATACTTCTAAAGTTTAATAATCAACAACCTGTAACTGGTGACACAGAAAAGTTATTTGATCAAACTGCCGATTTACTGACATTCGGAGCTATTGAATCATGTTCTGAATGCAACAGCTGTCAGTTTATTGTTAATAAATCTGGATATATATGTAATGGAAATCATTCTGAGTGGACCAAATGTAACAAGCTGCTAAAAGAGCCAACAAGATCGGCATGCATAGTGCCAAAAGAACTTAAAGCATTATATAATTTTTTGAATACCGTGAAAGAAATTCCATCTACACGGATCTTTAATAACTTTCCTCCCAATAAAAGTACCTTTTCTAGAAGTCTTTTGAAAACGAATAAAAACAATGATGTTTTGGTTAGATATTGGATTTTTCGTTCATGGGGTCGAATTGGAACAAATATTGGAAACTCAAAACTTGAAGAGTTCGACACGAGCGAGTCTGCAAAAAGAAATTTTAAAGAAATATATGCAGATAAAACTGGAAATGAATACGAGCAACGAGATAACTTTGTTAAAAGAACAGGTCGAATGTACCCAATCGAAATTCAATATGATGATGACCAAAAGTTGGTAAAACACGAAAGCCATTTCTTTACTTCCAAATTAGAGATTTCTGTGCAAAATTTAATAAAGCTGATTTTTGATATTGACTCAATGAATAAAACATTGATGGAATTCCATATCGACATGGATAAAATGCCGCTGGGCAAGCTCAGTGCTCATCAAATCCAATCTGCTTACAGAGTAGTGAAGGAAATTTATAATGTACTAGAATGTGGTTCCAATACTGCAAAACTTATTGATGCAACAAATAGGTTTTATACGTTAATTCCTCATAATTTTGGAGTTCAATTACCAACATTAATTGAAACACATCAACAAATTGAAGATTTGCGACAAATGCTTGATTCATTAGCTGAGATAGAGGTTGCGTACAGTATAATCAAAAGCGAAGATGTATCTGATGCTTGTAATCCTTTAGATAATCATTACGCACAGATTAAAACTCAGTTGGTGGCATTAGACAAAAATAGTGAAGAATTTTCGATTCTTAGCCAGTACGTAAAAAACACTCATGCATCTACCCACAAATCTTATGATTTAAAAATTGTTGATGTATTTAAAGTATCTCGCCAAGGAGAAGCAAGGCGCTTTAAACCATTTAAGAAGCTACATAACAGAAAATTATTATGGCACGGATCACGTTTAACTAATTTTGTTGGTATATTATCGCATGGTTTAAGAATTGCTCCCCCAGAAGCGCCACCAACAGGTTATATGTTCGGAAAAGGCATTTATTTTGCGGATATGGTTTCAAAATCCGCAAATTATTGTTGCACAAGTCAACAAAACTCTACTGGATTAATGCTTCTATCTGAAGTTGCTTTGGGCGATATGATGGAATGCACTTCAGCGAAATACATTAATAAACTATCAAATAATAAACATAGTTGTTTCGGTCGTGGTCGCACCATGCCAGATCCTACTAAGAGCTATATAAGAAGTGATGGGGTTGAAATTCCTTACGGAGAAACCATTACTGACGAACATTTAAAGTCATCGTTATTATATAACGAGTATATAGTATATGATGTTGCGCAGGTCAATATTCAATATTTGTTTCGTATGGAATTCAAGTATTCTTAT

CDS AA Sequence2

MDIELPYLAEYARTGRATCKGCKSTISKDNLRIAVMVQSAFHDAKVPNWFHKTCFFKNQRPSSVGDIQNIGNLRFADQKELTDLVENIQEVISAQLGKKRSKAFNLALKDFGIEYAKSSRSTCRGCEQKINKDLVRLRKTVYDTEVGMKYGGQPLWHHLECFAQLRSELGWFASGEDMPGFQSLADDDQAKVKNAIPPIKSEELPDTKRAKMELSDTNEEGEKKQRLKDQNDAYFRFRDDIKNKMKKKDIDILLKFNNQQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCNKLLKEPTRSACIVPKELKALYNFLNTVKEIPSTRIFNNFPPNKSTFSRSLLKTNKNNDVLVRYWIFRSWGRIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKYSY

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.