Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
caup (FBgn0015919) TF
 
(0.81/-1.30/3.34)

Factor activity

Additional information

caup [FlyBase] | caup [FlyMine] | caup [BDGP]

H. sapiens orthologues1

IRX4 (HGNC:6129, ENSG00000113430), IRX6 (HGNC:14675, ENSG00000159387)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCTGCATATGCGCAGTTTGGATACGCTGGCTACCCGACGGCAAATCAGCTGACTACCGCCAATACCGATAGCCAGAGCGGCCATGGCGGAGGATCGCCGCTATCCGGCACGAATGAGGCTTCGCTGAGTCCCTCGGGCGGCTCGACGGCCACCGGCCTGACTGCCGGTCCTCTGAGTCCAGGTGCTGTTTCCCAGTCGTCGCATCATGCGGGCCACAAGGGTCTCTCCACATCGCCGGCGGAGGATGTGGTTGGTGGCGATGTGCCCGTTGGCCTTTCATCTGCTGCCCAGGACTTGCCCAGCCGGGGATCCTGTTGCGAGAACGGCAGACCCATCATCACGGATCCCGTATCGGGACAAACCGTGTGCTCCTGCCAGTACGATCCGGCCCGACTGGCCATCGGTGGCTATTCCCGCATGGCCCTGCCCTCCGGCGGCGTGGGAGTTGGCGTCTACGGCGGACCGTATCCCTCTAACGAACAGAACCCTTACCCCAGCATCGGAGTGGACAACTCGGCCTTCTACGCACCTCTGAGCAATCCCTACGGCATCAAGGACACCAGTCCCAGCACCGAGATGAGCGCCTGGACATCCGCCAGCCTGCAGTCAACCACCGGATACTATTCCTACGATCCCACGCTGGCGGCCTACGGATACGGACCCAACTATGATCTCGCCGCCAGGCGGAAGAACGCCACGCGGGAATCCACGGCCACGTTGAAGGCCTGGCTGAGTGAGCACAAGAAGAATCCATATCCGACGAAGGGTGAGAAGATTATGCTGGCCATCATCACCAAGATGACCCTCACCCAGGTGTCCACGTGGTTTGCCAATGCACGTCGTCGGCTGAAAAAGGAGAACAAGATGACGTGGGAGCCGAAGAATAAGACGGAGGACGATGATGATGGCATGATGTCCGACGATGAGAAGGAAAAGGATGCTGGCGATGGTGGGAAACTCTCTACAGAAGCTTTCGATCCCGGCAATCAACTTATCAAATCCGAACTGGGCAAGGCGGAGAAGGAGGTGGACAGTAGTGGTGACCAGAAACTGGATCTGGACCGGGAGCCACACAATCTGGTGGCCATGCGTGGACTGGCGCCATATGCCACGCCCCCAGGCGCCCATCCAATGCACGCGGCATACAGTTCGTATGCGCAATCCCACAACACGCATACGCACCCTCATCCCCAGCAAATGCAACACCACCAACAGCAGCAGCAGCAGCAGCAGAATCAGCAGCAGCTGCAGCACCATCAAATGGATCAGCCGTACTATCATCCGGGTGGCTATGGCCAGGAGGAATCGGGTGAATTTGCGGCCCAAAAAAACCCGCTGAGCAGAGACTGTGGCATCCCAGTTCCGGCGAGCAAGCCCAAGATCTGGAGCGTGGCCGACACAGCCGCCTGCAAGACACCACCGCCCACCGCGGCGTACCTCGGCCAGAACTTCTATCCACCCTCATCGGCGGACCAGCAGTTGCCTCACCAGCCGCTCCAGCAGCATCAGCAACAGCAGCTGCAGCAGTTGCAGCAGCAGCAACAGCACCACCACCACCCGCACCATCATCATCCGCACCACTCGATGGAGCTCGGTTCGCCGCTGAGTATGATGAGCAGCTACGCCGGCGGATCGCCATATTCGCGGATACCTACGGCGTACACCGAAGCCATGGGCATGCATCTGCCCAGCAGCAGCAGTTCCAGTTCCTCCACCGGCAAGCTGCCACCCACTCATATCCATCCGGCGCCACAGCGGGTGGGGTTTCCCGAGATCCAGCCCGATACTCCGCCCCAGACACCACCCACTATGAAGCTGAACAGCAGCGGCGGCAGCAGCAGCAGCAGCGGGAGCAGCCACAGTTCCTCGATGCATTCCGTCACTCCGGTGACGGTGGCTTCCATGGTCAACATTTTGTACAGTAATACGGACAGTGGATATGGACACGGACACAGTCATGGACATGGGCATGGCCACGGACATGGACTCGGGCATGGACATGGACTCGGGCATGGGCATGGGCACATGGGCGTCACTAGTAATGCCTATCTAACGGAGGGCGGGCGTTCCGGGTCG

CDS AA Sequence2

MAAYAQFGYAGYPTANQLTTANTDSQSGHGGGSPLSGTNEASLSPSGGSTATGLTAGPLSPGAVSQSSHHAGHKGLSTSPAEDVVGGDVPVGLSSAAQDLPSRGSCCENGRPIITDPVSGQTVCSCQYDPARLAIGGYSRMALPSGGVGVGVYGGPYPSNEQNPYPSIGVDNSAFYAPLSNPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTLAAYGYGPNYDLAARRKNATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTEDDDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQKLDLDREPHNLVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQNQQQLQHHQMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAYLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGSPLSMMSSYAGGSPYSRIPTAYTEAMGMHLPSSSSSSSSTGKLPPTHIHPAPQRVGFPEIQPDTPPQTPPTMKLNSSGGSSSSSGSSHSSSMHSVTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHGLGHGHGLGHGHGHMGVTSNAYLTEGGRSGS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.