Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
MED10 (FBgn0036581) cofactor
 
(-0.82/-3.80/0.15)

Factor activity

Additional information

MED10 [FlyBase] | MED10 [FlyMine] | MED10 [BDGP]

H. sapiens orthologues1

MED10 (HGNC:28760, ENSG00000133398)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCTGCACCGCTAGAGAACCTTGAGACCCAGCTAGAGATGTTCATCGAGAATGTTCGTCAGATCCGCATAATCGTAAGCGATTTTCAGCCACAGGGTCAAAATGTACTCAACCAGAAAATTAACAGCTTGGTGACCGGCCTACAAGAGATCGACAAGCTGCGCTCCCAGGTGCAGGACGTCTATGTGCCATTTGAAGTGTTTTTTGACTACATCGACCAAGACAAGAATCCTCAGCTGTACACCAAGGATTGCGTGGAGAAGGCACTGGCCAAGAACGAGGAGGTCAAGGGCAAGATCGAGGGCCTGAAGAAGTTCAAAACGAATCTGCTGCTGGAGCTGTATAAAACATTTCCCAATGAGATGAACAACTACCGCGCTTATCGCAAGGACTCCATG

CDS AA Sequence2

MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQKINSLVTGLQEIDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKIEGLKKFKTNLLLELYKTFPNEMNNYRAYRKDSM

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.