Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Bin1 (FBgn0024491) cofactor
 
(-0.73/-2.42/-0.18)

Factor activity

Additional information

Bin1 [FlyBase] | Bin1 [FlyMine] | Bin1 [BDGP]

H. sapiens orthologues1

SAP18 (HGNC:10530, ENSG00000150459)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCCAACGTGGAATCTATGATTGTGGAGGAAAAGACGCAGGTCAAGCAGATTGACCGCGAGAAGACCTGTCCTATGCTGCTCCGTGTCTTCTGCTCTACGGGACGACACCACTCCGTGTCGGAGTATATGTTCGGCAACGTGCCCACCAACGAGCTTCAGATTTACACCTGGCAAGACGCCACCCTGCACGAACTGACCTCTCTGGTGCGAGACGTCAATCCGGACACCCGGAAGAAGGGCACCTACTTTGACTTTGCTGTCGTGTACCCCAACTTCCGGAGTAATCACTTCCAGATGCGCGAAATCGGAGTGACCTGCACGGGTCAAAAAGGAATCGATGATAATAAGACACTTGCTCAGGCCAAATTCAGCATTGGAGACTTTCTGGACATCTCGATTACTCCGCCCAACCGACTGCCGCCAACCGCCAGGCGCCAGCGTCCGTAC

CDS AA Sequence2

MANVESMIVEEKTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTWQDATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKTLAQAKFSIGDFLDISITPPNRLPPTARRQRPY

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.