Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
RhoBTB (FBgn0036980) cofactor
 
(-0.16/-0.58/0.45)

Factor activity

Additional information

RhoBTB [FlyBase] | RhoBTB [FlyMine] | RhoBTB [BDGP]

H. sapiens orthologues1

RHOBTB2 (HGNC:18756, ENSG00000008853), RHOBTB1 (HGNC:18738, ENSG00000072422)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGCCCAAAATGGACAACGAGCAGCCGCATCAAGAGCTAGTGAAGTGCGTCCTGGTGGGGGACACGGCCGTGGGCAAGACGCGACTGATCTGCGCGAGGGCCTGCAACAAACACGTCTCGCTATCTCAGCTCCTCTCTACGCACGTGCCGACCGTGTGGGCCATTGACCAGTATCGCATATATAAGGATGTACTCGAGCGATCATGGGAGGTGGTCGATGGAGTGAATGTCTCACTTCGCCTATGGGACACATTTGGTGACCACGACAAGGATCGGCGCTTCGCATACGGCAGATCCGATGTGGTGCTGCTGTGCTTTTCCATTGCCAGTCCGATTTCCCTGCGCAACTGCAAGATGATGTGGTATCCGGAAATTCGCCGCTTTTGTCCGGATGTTCCCGTCATTCTAGTTGGCTGCAAGAACGACCTGCGCTACATGTATCGCGACGAGAACTATCTCTCGTATTTCGGCGAGAAGGGAACCTTTGTTCGAGCCGCGTTGAAGAGTGACCTGGTTATGCCGGATGAGGCGCGTGCCGTCGCCAAAGAGCTAGGAGTGGCGTACTACGAGACCAGTGTTTTCACATACTTTGGGGTGAACGAGGTGTTTGAAAACGCCATCCGATCCGCGTTGATTGCACGCCGACAGCAGCGCTTCTGGATGACAAACCTGAAGAAGGTGCAGAAGCCCCTGCTGCAGGCGCCGTTCCGGCCACCGAAGCCACCACCACCGGAGGTCACCGTCATGGTCGGCAACTATCGGCAGGACATCTACAACATGTTCCTGTCGCAGGCCTACACCGACCTCGTCCTGGTCGGGGCGGGTGGCACCAAGTTCGCCGTGCACAGGTTCATGCTAGCCGCCGCGTCCAGCATCTTCCAGCGCCTGCTTAGCACTGAGCTGACTGATATGGGCGGGCGGAGCAGCAGCGAATCTAGCATGGTCAGCTCAACATTCGGGGAGGCCACCATTGCGGACTTTAACGATGACACGGAGGCCCTGATCCGCTACGAATCACGCACACAACGAATGTGGGAACACTTGAAGCGCCGCTCCAGCTACCAGGCGTTGCCTCTCATGGAGTCTAAGCGGTCCAACGATTTGTACAGGGAGCTGCATCATCCGGTCCTGCAGAGCATTCGCCTGGTGCACGTGGAAAACCATCGGGGTGTAAATGGTCTGCAGACGATTGTCACCCTTAGCAAACTTATCTCTCCGCAAGCTCTGCACCAGTGCCTGAGATTTATTTATACCGGTACCATTGACAAGGATTGCGATAATATCGAGGAAATTCGAGAAGCTGCCGATCTATTAGAACTGCCGCAACTGACTCAGCTACTTTCCAGGCCTCAAACCGTTATGGAGAACTCCAGCGATGAGCCAAATCCGCACATTTGCCTGCGCATCAAAGAAAGCATGGAACGGCATTGCATTGGTGACGGGTGCTTCAGTGATGTCACCTTTGAATTGGACGATGGCTTAATGAAGGCACACCGCGCTGTGTTGGTTGGTCGTTGTGATGTCATGCGCGCAATGTTGTTAGGCGACTTTCGCGAGGCTCATTCCAATGTGATCGTATTCCCTGGCGTTACCATTTACACATTCCACAAGCTGCTGTGCTATTTGTACACAGACCAGATTCCGCCAATCTCGGCCGTCAAGTGCCTCAATCTGCTGGAGCTGGCCAATAGACTCTGCCTGCCGCGGCTGCTCAACCTGGTTGAATGCCGCGTTATTGAAGATCTCACTCTGATTTCTCAGAACGAAACCAATGAAACGGTGGATCACTGTCTAAAGCTGCTCGAGCCAGTGAAGCTGCACAACGCACATCAATTGGCCGAGTGGTGCATGTCATACCTGTGCGTCAATTACAACCTTATTTGTAAGTTTTCACTCAAGGGCCTAAAGGCGCTACACCAGGATAATCAGGAGTACTTGCGCGAGCACCGATGGCCTCCAGTCTGGTATCTGAAAGACTATGATTACTATCAGCGATGCCTGAACGAGCTGAACAAGGAGCTTAAGCTAAAGACTTCGAGGCGGGAATCGCCTAGCGATGACGAGGGCTGTCTGTGCTTTACGGGCGTATTCTCTTGCTGGCTGTTAGGTAAATCGAAGCGAAGCGCTGATGTGAGTGGAACCACGGATAACAGCAACGCAGATAATCAGATCTTCAACAGCGCCGGCAACTCGCTCAACCACATTGATCTGGAGGCGGACATGGACCTGAATCTC

CDS AA Sequence2

MPKMDNEQPHQELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVNEVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVMVGNYRQDIYNMFLSQAYTDLVLVGAGGTKFAVHRFMLAAASSIFQRLLSTELTDMGGRSSSESSMVSSTFGEATIADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIRLVHVENHRGVNGLQTIVTLSKLISPQALHQCLRFIYTGTIDKDCDNIEEIREAADLLELPQLTQLLSRPQTVMENSSDEPNPHICLRIKESMERHCIGDGCFSDVTFELDDGLMKAHRAVLVGRCDVMRAMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQIPPISAVKCLNLLELANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKLLEPVKLHNAHQLAEWCMSYLCVNYNLICKFSLKGLKALHQDNQEYLREHRWPPVWYLKDYDYYQRCLNELNKELKLKTSRRESPSDDEGCLCFTGVFSCWLLGKSKRSADVSGTTDNSNADNQIFNSAGNSLNHIDLEADMDLNL

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.