Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
CG8830 (FBgn0033738) cofactor
 
(-0.36/-2.59/0.49)

Factor activity

Additional information

CG8830 [FlyBase] | CG8830 [FlyMine] | CG8830 [BDGP]

H. sapiens orthologues1

USP35 (HGNC:20061, ENSG00000118369), USP38 (HGNC:20067, ENSG00000170185)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCCGTTAAGCAGAATAACAGCGAGGCGGGTGATAATGCCTCGGATAATGCCGGAGGAGCTGGCAACGGCATTCCGCCCAACGCCAAACCCATGTCCGCGAACGGAATGGCGAATGCCGAAGAGAACGTATTGCCAAAGGGCATGGACACGGGTTCGCCCGCTGGCGAGAGCCTGAACTCCAACCGATCGGGCAAGCGGGATATTAAGGCCCTGCTGGCATACCTCCAAAGCATCGATATGCCGGAGCAAGGCCACAATGTGATGGCCATCTGCGAGAGGGTTATCGTGGACTTGGCCCGTCTGCAAATTCCACGAGGCGCATCCTGTCCACGCCTAAAGGAAGACGTCTGCCAGGTCGGTGCCTTTCTGGCTACGCGCAACGAGAAGTTCCACCAAATGTTCTACCTGCGTGTCGTCTACGAGCTGATCACCAAGTCGCCATTCGAGCCACCACCCTCGTGTGCCGTGGCCATTGTGTTCCAGCTGTTCGACTCCACGCAGATCCTGGAGGCTGTACACTCGCTGCTGGAACAGAATGTGCAGGACTCGAGCATTAAGAAGACGGTGAACCTGCTCTGTGATTGGATCACGTACTGCACCTTTTGCAGCACTCTCAATCTTTGGGTGCTGGCGCTGCTCAAGGGGCTAAGGGATCAGGGCAAAATGGCGCTGCTCGACGAGATTGCAATGGACAACATCGAGAAGCTGTTCCACGTGATGATCTTTCCGGCGCTGAGGCAAAAGGCCGCACCGGTTGTGTTTCACATGCTGTCAACGATTAATCAGACCCCCGAGGTTTTTCACAAGATCTTGCCAAGGATCCCACGAGTCCTGCAGTATGTGAAGAATCAGTCGACCACCATGGACGAGATTGGCCTGGAAACCAAGAAATGTCTGCAGCAACTGGTCGACCTAACCAGCGCCCTAATGCTACGTTTCTATGATCAGGATGAGCTCTATGTCGCAACCAAGAAAGCCCTGCAGACCTATGAGCCCTCTCCGAATTGCGTGGCTCTGGCAAAGGCAATGCATGAGAATGCCCAGCCGTGGGGTCGGCGGAATGCGAGGGTTGGACTCGTTAACCTGGGGAATACCTGCTACATGAATAGCGTACTTCAGGCGCTAGCCATGACCAGCGATTTTAGCAGGCAAATCCTGCTTATCGAGTGCAATTCAGTGCTGCTCATGAAAGTGCAGCAGCAGATTGCCCTGATGCATCACTCGCTGCGCTACGAACTAACGCCTTCGCGAGTGCTGAACGCCACCCGGCCGCCTAGCTTCACGCCCGGCCTACAACAGGACAGCTCCGAGTTCCTAGGATATCTGCTCGACCTGCTGCACGAGCACGAGATCAACAGCTCCTCAGTCACTGGTCACAGTGTTGGTCCTCCGAAGACCGGCAGGGAAGTGGACGACGTGCCCGCACTGCTGAGCGAGGATATATTGTCGAGCGGCGTTATTCCGTACAACAGCAAGGATCACGAGCTCAGCAGTGGAAGCAACAGTGACAATTGTAATCACAAGCCCACACCGACACCACCCGCGACTCCCACCAAAGCCACCAACGGCTTAAAGCAGCAGGGCCAGCAGGTTGATCAGGCGAAGCCACCATCTACCATTGACAAGACGTTCGCTGGCAAGCTTTCCACCACCTATCGATGTTTAAACTGCGGCTGGGAGAGCCGGAACGAGGACAGCTTTCGCGAGCTGCAGCTGTCTTTTCCCGATGATAAGGAAGACTGTGGAGCCACCAACTACTCGGTGCAGGATCTGATCGAGTACTACTGCTCGCCCGAGAAGCTGGACGGTGACAATCAATATTTCTGTCCACAATGCAAGAAGCTTTGCGATGCGGAGCGCCACATCGGGGTCACCCAGGCACCGAAGAACCTTATTCTCACGCTCAAGCAGTTCAAGTACGATCAGAAGTACCACTTCCGCACCAAGCTCATGCATAAGGTGTTCCACGATGAGAGCGTCACAGTAAAAATGTCGGCAAAGGACTCGCTGCAGGAGATGTCCACTGTGCACTATGATCTGTATGCGGGTGTTGTTCACGCCGGGTACAGCATGGATTCCGGTCACTACTTTACGTTCGCGGCGGATCAAGCCAAGAATTGGTACAAGTTCAACGATAACGTGGTTACCCACTCCAAGCCGGAGGAGATGCACAATCTCACTTCGCCCAACACGCCCTACATCCTGTTCTACAAGATGTGCGGCCACTCCAATGAGTCTAATTCGGTTACGGCCAGCTGCAGTTCGAGTATGGTATCGGGCTCAAATGACCAGGTGGTCTCGGTGCCACTGTCGCCGCCTCTGAAGCTGGAGGAGTTGCCACGCCGACTTCGCGACTACGTAAGAAAGGACAACCATGTTTACAACGAAGAGTTGAAGATGCAACGCTTTAAGCGTGGCAACAGCGGTCACGGCAATGCGTTTGTCAGCCGGCACAACTTTGATGGCGATGGTGACGAGGACGACAAGGCGCCGCCGCCGCCCGGAGGATGTGGAGGCAATGGACTGGGCATGAACATCAACCGCTTCGTCTTC

CDS AA Sequence2

MAVKQNNSEAGDNASDNAGGAGNGIPPNAKPMSANGMANAEENVLPKGMDTGSPAGESLNSNRSGKRDIKALLAYLQSIDMPEQGHNVMAICERVIVDLARLQIPRGASCPRLKEDVCQVGAFLATRNEKFHQMFYLRVVYELITKSPFEPPPSCAVAIVFQLFDSTQILEAVHSLLEQNVQDSSIKKTVNLLCDWITYCTFCSTLNLWVLALLKGLRDQGKMALLDEIAMDNIEKLFHVMIFPALRQKAAPVVFHMLSTINQTPEVFHKILPRIPRVLQYVKNQSTTMDEIGLETKKCLQQLVDLTSALMLRFYDQDELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFSRQILLIECNSVLLMKVQQQIALMHHSLRYELTPSRVLNATRPPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTHSKPEEMHNLTSPNTPYILFYKMCGHSNESNSVTASCSSSMVSGSNDQVVSVPLSPPLKLEELPRRLRDYVRKDNHVYNEELKMQRFKRGNSGHGNAFVSRHNFDGDGDEDDKAPPPPGGCGGNGLGMNINRFVF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.