Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Spt3 (FBgn0037981) cofactor
 
(-0.53/-3.40/0.25)

Factor activity

Additional information

Spt3 [FlyBase] | Spt3 [FlyMine] | Spt3 [BDGP]

H. sapiens orthologues1

SUPT3H (HGNC:11466, ENSG00000196284)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGAACTACAACGCCAAGCGAGTAATGCGACAGAACTCGGTTTGCGTGGGTTCCAACGACATGGCAGCGTCGCCGATAATGATTGGACCTGCCCCGCCCTCGGCGCCCAGCACGCCGCAACTGCAGACCACCGAGGACATCAAGCCACTGCTTGTGCAGCGCCAAGTGATTCTGCTGCAAAGTGGAAGCATACCGACGAATCCCTCGCCACAGCAGATCAACCTAGCTGGACATAATGTAGCCGGTGGTGCCAGCGGGAGCAACGTTGCCAACGTTCTCATTCCGGATGATGCACCTGTCTCACTGCTCACAGAGATTGCGGATATCATGCGAAGCTTCGGCGACAGCGATCAGCCCAGGACGGGAAGTGTCAAGCTGGTGGAGCAGATCCTGCAGCAGCAGCTGCGCGGCATCTTCAATGAGGCTTCGCTGGTGGCCATGCGGCGGAAACAGAATCCCTGCCCGTCGCAGGCGGACTTTGAGTTCCTGATGCGCAACCATCCGGTGAAGATAGCTCGGATGCGAAAGCACCTCAAGGATATGCGCATACTCAAAAGGTTCCTTAGTATCCGCACGGGAAGGCCGCAGGACTTCATGGACGACTTGGAGCAGCAGGAGGAGGACGAGGAGCTGGCCATCGATGTGTACGAGCTACACGACGAGGACCGAATGCGAAGATTATTCCGCGCAGATCGGATATCGCAGATCCTTACGGGCCAGCAATACCTGGAGTTCAATGAGGCGCGCAAGACGTCATTCTACTGCCGCCATGGGGAGAAGATCAAGAACAAGTTCCGCCGCTTTCTGGACCTGCCCGCGGACCTTCGCATCCCAACGCCGACAATGAACATTTTGGCCTATCTGGCGCATGAGACCATTGCCGCCATTGTCGACTATTCGATCCTGACGCGCCTGAACTCGGACAACCGTGCGACCGAGCCCTACAGCCGAGTGACCTCCGCCGGAGGCAGTCCGGCTATGATGCACGTCTGTCCGGAGGTCACACAGGGTCGCGGCATGGAGGTGGTCAAGCCAATCAGTGTACCGGAGATCCACGAGGCCATGCGCCGTTTCCGGCAAATGAGCAGCCGTAAGATTGGGCGGTATCGCAACTCTTGCGACATCGATTTCCGGCGCAGTTTTCTAGCCATT

CDS AA Sequence2

MNYNAKRVMRQNSVCVGSNDMAASPIMIGPAPPSAPSTPQLQTTEDIKPLLVQRQVILLQSGSIPTNPSPQQINLAGHNVAGGASGSNVANVLIPDDAPVSLLTEIADIMRSFGDSDQPRTGSVKLVEQILQQQLRGIFNEASLVAMRRKQNPCPSQADFEFLMRNHPVKIARMRKHLKDMRILKRFLSIRTGRPQDFMDDLEQQEEDEELAIDVYELHDEDRMRRLFRADRISQILTGQQYLEFNEARKTSFYCRHGEKIKNKFRRFLDLPADLRIPTPTMNILAYLAHETIAAIVDYSILTRLNSDNRATEPYSRVTSAGGSPAMMHVCPEVTQGRGMEVVKPISVPEIHEAMRRFRQMSSRKIGRYRNSCDIDFRRSFLAI

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.