Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
RpA-70 (FBgn0010173) cofactor
 
(-0.59/-3.30/0.18)

Factor activity

Additional information

RpA-70 [FlyBase] | RpA-70 [FlyMine] | RpA-70 [BDGP]

H. sapiens orthologues1

RPA1 (HGNC:10289, ENSG00000132383)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGTCCTGGCATCTTTGTCCACTGGTGTGATTGCTCGCATTATGCATGGCGAGGTTGTGGATGCCCCGGTTCTCCAGATCCTGGCAATCAAGAAGATTAACAGCGCAGCGGACTCAGAGCGCTATCGCATCCTAATCTCCGACGGCAAGTACTTTAACAGCTATGCGATGCTGGCCAGTCAGCTGAACGTGATGCAGCACAATGGAGAATTAGAGGAGTTCACCATTGTCCAGCTAGATAAATATGTGACCTCACTGGTAGGCAAGGACGGAGCCGGAAAACGCGTTCTCATCATTTCCGAACTAACTGTGGTGAATCCTGGCGCCGAGGTTAAGTCCAAAATTGGCGAACCCGTTACGTATGAAAATGCAGCCAAGCAGGATCTGGCGCCTAAGCCAGCAGTAACATCTAATTCCAAGCCAATTGCCAAAAAGGAACCGAGCCACAACAACAATAATAACATAGTAATGAATTCCTCTATTAATAGTGGAATGACACATCCCATTTCTAGCCTAAGTCCCTACCAAAATAAGTGGGTGATTAAGGCTCGCGTGACCTCAAAATCCGGCATTCGCACCTGGAGCAATGCCCGCGGCGAGGGCAAGTTGTTCAGCATGGATTTAATGGACGAATCGGGCGAAATTCGGGCCACTGCCTTCAAGGAACAGTGCGATAAGTTCTACGACCTCATTCAAGTGGATAGCGTGTACTATATATCAAAGTGTCAATTGAAACCGGCAAACAAGCAGTACTCTTCGCTGAACAACGCCTACGAGATGACTTTTTCCGGTGAAACAGTTGTCCAGCTTTGTGAGGATACCGACGATGATCCCATACCGGAAATTAAGTACAACCTTGTTCCTATTTCCGATGTGTCGGGTATGGAAAATAAAGCAGCGGTAGACACAATAGGAATTTGCAAGGAGGTGGGCGAGTTGCAATCATTCGTAGCTCGCACCACAAACAAGGAATTCAAGAAACGGGACATAACCCTAGTGGACATGAGTAACTCGGCCATCAGCTTGACCCTTTGGGGGGATGATGCCGTTAACTTTGACGGTCATGTGCAGCCTGTGATCCTGGTCAAGGGAACACGCATTAACGAGTTCAATGGCGGAAAGTCCTTGAGCCTCGGCGGTGGCTCAATCATGAAGATTAACCCCGATATACCCGAGGCACATAAGCTGCGCGGCTGGTTCGACAATGGAGGTGGTGACAGTGTCGCCAATATGGTTTCGGCGCGAACGGGCGGAGGAAGCTTCTCTACTGAATGGATGACGCTTAAGGATGCGCGGGCTCGCAATCTCGGCAGCGGCGACAAGCCTGATTACTTCCAGTGCAAGGCAGTGGTGCACATTGTCAAACAGGAAAATGCTTTCTACCGAGCCTGCCCTCAGAGCGACTGCAACAAGAAGGTTGTCGATGAGGGCAACGACCAGTTCCGCTGCGAGAAATGTAACGCACTGTTTCCCAACTTTAAGTACCGACTGCTGATCAACATGAGCATCGGGGACTGGACTTCCAACCGTTGGGTCAGCAGTTTTAACGAGGTCGGTGAACAGCTTCTCGGGCACACTTCGCAGGAAGTGGGTGAGGCCCTTGAGAACGACCCTGCCAAAGCCGAGCAGATTTTCTCAGCACTCAACTTCACTTCACACATCTTTAAGCTGCGCTGCAAGAACGAGGTTTACGGGGACATGACTCGCAACAAGCTCACTGTGCAGTCTGTAGCCCCTATCAATCACAAGGAGTACAATAAGCACTTGCTCAAGGAGCTGCAGGAGCTAACCGGCATTGGCTCATCAAAC

CDS AA Sequence2

MVLASLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYENAAKQDLAPKPAVTSNSKPIAKKEPSHNNNNNIVMNSSINSGMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMDESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENAFYRACPQSDCNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQELTGIGSSN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.