Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Xbp1 (FBgn0021872) TF
 
(-1.39/-2.83/-0.51)

Factor activity

Additional information

Xbp1 [FlyBase] | Xbp1 [FlyMine] | Xbp1 [BDGP]

H. sapiens orthologues1

XBP1 (HGNC:12801, ENSG00000100219)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCACCCACAGCAAACACAGTGCTAATTACCGTGCCGCGGACAGCAATCACATCGAATAATCTGCCCAAATTGCGGCCCGCCCCCCTTACGGCAGCTCTGCTGAAGGTGTCGGCCACGCCCTCCGCCTCGCCCACGCCCTCGAGTTCGGGATACGCATCCTCGTCGAACATGGATGACGATAACATGGCTGCATCCCAGCCCAAGGCCAAGAAGCGTCGCCTGGACCATCTAACCTGGGAGGAGAAAGTGCAAAGAAAGAAGCTAAAGAACCGTGTGGCCGCCCAGACATCGCGTGACCGCAAGAAGGCACGCATGGAGGAGATGGACTACGAGATCAAGGAGCTGACAGACAGAACGGAAATACTACAGAACAAGTGCGATAGCCTGCAGGCCATCAACGAGTCACTGCTGGCCAAGAACCACAAGCTGGACTCGGAGCTGGAGCTGCTGCGCCAAGAACTCGCCGAACTGAAGCAGCAACAGCAGCACAACACCAGATGCATCAGCCAATCCAACGCCAGCGCAGGCGCTGAGGGCTGTGCGTCCACCAACCTTGGATCTGCAGCATCCAAAGCTGACCCTCTGCCGCAGGGTATACAACAGGTGGACACACAGTCGTCAGCGCGTCTGCTGGCGGAGCAGCTGAAGAGCAGCAAGAGCCTGGCCTCACTCTGGAAAGTTGTGGCCCTCTGCCTACTCTACAAGACATGCTTGGCGTCGACGAAGAGTTCGACGTCAAGCGCCTCGAAGAGCTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAAACAGGCGCTGGAGCGAGCAGCCCAGCTGCTGCCCAAGATGCAGGCAACGCAGAGCGATTGCCTGGACCAATGGTGGGGCCCGCAGCAGAGCGCTTGGAATCCGACGGGCATAGAGCTAATGGCC

CDS AA Sequence2

MAPTANTVLITVPRTAITSNNLPKLRPAPLTAALLKVSATPSASPTPSSSGYASSSNMDDDNMAASQPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMDYEIKELTDRTEILQNKCDSLQAINESLLAKNHKLDSELELLRQELAELKQQQQHNTRCISQSNASAGAEGCASTNLGSAASKADPLPQGIQQVDTQSSARLLAEQLKSSKSLASLWKVVALCLLYKTCLASTKSSTSSASKSWPKVCSQISQQTWKQALERAAQLLPKMQATQSDCLDQWWGPQQSAWNPTGIELMA

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.