Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Six4 (FBgn0027364) TF
 
(-0.70/-2.91/0.00)

Factor activity

Additional information

Six4 [FlyBase] | Six4 [FlyMine] | Six4 [BDGP]

H. sapiens orthologues1

None.

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTTTGACAAGAATTTGGACGGCAACAATCTGTCGGTCTCCATCGGTGGGGATTTGGATTCGACGAGTTCCGGCGGCACATCCTCGGATCACTCGGCTGTCCATCAGGACAATCTCAGCTCGCCGATGGCCTACGGATCCCTCTTCCTCCCAAATGCTGGTTATCGTGGCAACCTGTCATGCAAAACGGTCCTGCAGCTGGACAAGTTCGCACCCTACGAGGGTGTGGAGAAGGATCACCTGCTGGAGCGGCGGTTTCAGGACATCACCAATGACTACGACAAGTCGCCGCCGCCCACCGCCTCGACCACGCCCACGCACTATCCCAGCCTGAACAGCATAATATTTGAGAATGGCAGCAGTGGCAACCTGGGCGATCTCAACGGGAACACGAAGACGGATCTATGCGCCGGCCTGCAGAGAAGTGGCGGCGGATTGGGGGGCAATGCCGGCAGTGGTGGCCACCTCATATCCAATCTCACAGCCGCCCACAACATGTCCGCCGTGAGCAGCTTTCCTATCGATGCCAAGATGCTGCAGTTCTCCACGGATCAGATCCAGTGCATGTGCGAGGCACTGCAGCAGAAGGGCGACATCGAGAAGCTGACCACATTCCTCTGCAGCCTGCCGCCCAGCGAGTTCTTCAAGACCAACGAGAGTGTCCTGCGGGCCCGCGCCATGGTGGCCTACAATCTGGGCCAGTTCCACGAGCTGTACAACCTGCTGGAGACGCACTGCTTTTCGATCAAGTACCACGTGGACCTGCAGAACCTCTGGTTCAAGGCCCACTACAAGGAGGCCGAGAAGGTGCGTGGCCGACCACTGGGCGCCGTGGACAAGTACCGTCTGCGCAAGAAGTATCCCCTGCCCAAGACGATCTGGGATGGCGAGGAGACGGTCTACTGCTTCAAGGAGAAGTCGCGCAACGCTCTCAAGGACTGCTACCTGACCAACCGATATCCCACCCCCGACGAGAAGAAGACGCTGGCCAAGAAGACCGGGCTCACGCTCACCCAGGTCTCCAACTGGTTCAAGAATCGTCGACAGCGGGATCGCACGCCCCAGCAAAGACCGGACATCATGTCGGTGCTGCCCGTGGGCCAACTGGATGGCAATGGATTCCCGCGCATGTTCAATGCTCCAAGCTATTATCCCGAAACGATTTTCAATGGGCAA

CDS AA Sequence2

MFDKNLDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLFLPNAGYRGNLSCKTVLQLDKFAPYEGVEKDHLLERRFQDITNDYDKSPPPTASTTPTHYPSLNSIIFENGSSGNLGDLNGNTKTDLCAGLQRSGGGLGGNAGSGGHLISNLTAAHNMSAVSSFPIDAKMLQFSTDQIQCMCEALQQKGDIEKLTTFLCSLPPSEFFKTNESVLRARAMVAYNLGQFHELYNLLETHCFSIKYHVDLQNLWFKAHYKEAEKVRGRPLGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNALKDCYLTNRYPTPDEKKTLAKKTGLTLTQVSNWFKNRRQRDRTPQQRPDIMSVLPVGQLDGNGFPRMFNAPSYYPETIFNGQ

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.