Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
pho (FBgn0002521) TF
 
(-0.63/-2.42/0.66)

Factor activity

Additional information

pho [FlyBase] | pho [FlyMine] | pho [BDGP]

H. sapiens orthologues1

YY2 (HGNC:31684, ENSG00000230797), YY1 (HGNC:12856, ENSG00000100811)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCATACGAACGTTTTGGAATTATTCTTCAAAGTGAACAGTACGATGAAGATATAGGCAACACAAAAGTCAATCAGAAAATGAATGAAGGCAACCACTACGACTTACACAGAAAAAATGCGTTTGACCGAATTATTCATTCAGAATCAAAAAAAGGTGATAACGTAATTAATTACAACATTCATGAAAACGACAAAATAAAAGCGGCTGACAATATATTTTCTTCTAAATTAAAAATGAACCCGAATATGAGCTATGAAATGAATATCAACTGTTTTAAAAATATTGGATATGGCGAAAATCAAGAAACTTCAAAAGTTTTAACAAATAGTTTATCGAACAATGATATTAATACCGAAGAGTCTGGTGTTGTCGATAAAAATTCACCTTTCCTAACCTTAGGTACAACTATACTTAATTCAAACGGCAAGTCAAGACGGTGGGAACAAAAGCTTGTTCATATTAAAACTATGGAGGGAGAGTTTAGTGTTACAATGTGGGCATCCGGGATATCAGACGATGAATACTCTGGTTCAGATCAAATCGTTGGGGCTTCGGATTTATTAAAAGGAAAGGAAGAATTTGGCATTGATGGCTTCACGTCTCAACAAAATAAAGAATACCAGAAAATGGAGTCAAAATTTACAAATGCACAGACCCTTGAAATGCCGCATCCTATAAGCTCAGTTCAGATCATGGATCATTTAATAAAGGAAAGGGGAAATTTATCGCAAGAAAATAATATTTCCGAAAGAATTTTATCTAAGACCACCTTAAGCTTTGAAGAGCCAATCTTGCTTCCGGATTCTTCAAGTATTGAGTTAGTTAACGAAACTGCCGCAATGACAATTAATAATCACAGAACTTTAAGTAATCATACGGGCAACACCGGTGATCTGCATGCTTTGCCCAGCTCAGTGCCATTTCGTATTGGCTTGCATGAGGGGCAAGTAAATGATTGCTTATCAACAATATCACAATCAACTCACCAAGACAATACAGACTCGACTGGATGTGGGGAAATGAATCTTTCCGAAGTTACAGTATCTTATACAAATGATAAAAAAATAGCTTGCCCACATAAGGGTTGTAATAAGCACTTCAGAGATTCATCTGCAATGCGAAAACATTTGCACACTCACGGTCCTCGAGTCCATGTTTGTGCAGAATGTGGAAAAGCTTTCGTAGAAAGCTCAAAGCTTAAAAGACATCAGTTGGTTCACACCGGTGAAAAACCATTTCAATGTACATTCGAGGGATGCGGAAAACGATTTTCTCTGGATTTTAACTTAAGAACACACGTAAGAATACATACTGGAGATAGACCATTTGTTTGTCCGTTTGATGCCTGTAATAAAAAATTTGCTCAATCCACGAATTTAAAATCGCACATATTAACTCACGCAAAAGCAAAGAGAAATACCAGTATTTCGGGGAAAAGTGGTTGTTCAAACGCTGAATCAAACAGCCAGAGTGAAGATACCTCTGCAAACTATGTTAAGGTTGAGTTACAGGATAGTGTTACAGAAAACCATGTACCGTTTGTGGTATATGCAGAC

CDS AA Sequence2

MAYERFGIILQSEQYDEDIGNTKVNQKMNEGNHYDLHRKNAFDRIIHSESKKGDNVINYNIHENDKIKAADNIFSSKLKMNPNMSYEMNINCFKNIGYGENQETSKVLTNSLSNNDINTEESGVVDKNSPFLTLGTTILNSNGKSRRWEQKLVHIKTMEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGFTSQQNKEYQKMESKFTNAQTLEMPHPISSVQIMDHLIKERGNLSQENNISERILSKTTLSFEEPILLPDSSSIELVNETAAMTINNHRTLSNHTGNTGDLHALPSSVPFRIGLHEGQVNDCLSTISQSTHQDNTDSTGCGEMNLSEVTVSYTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPFVCPFDACNKKFAQSTNLKSHILTHAKAKRNTSISGKSGCSNAESNSQSEDTSANYVKVELQDSVTENHVPFVVYAD

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.