Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Scm (FBgn0003334) cofactor
 
(-0.49/-3.41/0.61)

Factor activity

Additional information

Scm [FlyBase] | Scm [FlyMine] | Scm [BDGP]

H. sapiens orthologues1

SCMH1 (HGNC:19003, ENSG00000010803), SCML2 (HGNC:10581, ENSG00000102098)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGTCGGGCGGACGTGATAGCAGTACCAGTAGCGGGAGCAATTCTGCTGCGCCAGGGGCCAGTACGAATGCCACCTCCTCCGCATCCGCATCCGCCTCCTCCACATCCACATCCGCATCCCCTGGAAGTACAACATCGCCCGCGTCCACGCAACGGCAACGAGGTAGACCGGCCAAACGAGCCACATGCACCTGGTGCGGCGAGGGCAAGCTACCGCTGCAGTACGTCCTGCCCACGCAGACCGGCAAGAAGGAGTTCTGCTCGGAAACATGCATTGCCGAGTTCCGCAAGGCGTACAGCAAGGGGGCGTGCACCCAGTGCGACAACGTCATCCGCGATGGGGCGCCCAACAAGGAGTTCTGCTCGATCATGTGCATGAACAAGCACCAGAAGAAGAACTGCTCGACCAGGCACAGCGGCGGATCGGCATCGGGCAAGGGTCTGGCGGAAAGCGAGCGCAAGTTGCTGGCCAGTGGAGCGCCCGCACCAACGGGGCCCTTTCAATACGAGAGCTTCCACGTCTTCGACTGGGATGCCTATCTAGAGGAAACGGGTAGCGAAGCTGCTCCTGCAAAATGTTTCAAACAGGCTCAGAATCCTCCCAACAATGATTTTAAAATCGGAATGAAGCTGGAGGCTTTGGATCCGCGCAACGTCACTTCCACCTGCATTGCCACCGTGGTCGGAGTGCTTGGCTCCAGACTGCGGCTACGCCTGGATGGAAGTGACTCCCAGAATGACTTTTGGCGGCTGGTCGATTCTACGGAGATCCATGCTATTGGACACTGTGAAAAGAACGGTGGCATGCTGCAGCCGCCTCTGGGATTCCGCATGAACGCATCCAGCTGGCCCGGCTATCTGTGCAAGATCCTCAACAATGCCATGGTGGCGCCAGAAGAGATCTTCCAGCCAGAGCCGCCAGAGCCAGAAGAAAACCTGTTCAAGGTGGGCCAGAAACTCGAGGCTGTCGACAAGAAGAACCCGCAGCTCATCTGCTGTGCAACAGTAGATGCAATCAAGGATGATCAGATCCATGTAACATTCGATGGTTGGCGAGGGGCATTCGACTACTGGTGCAATTACCGATCGCGTGACATTTTTCCCGCCGGCTGGTGCGCTAGAAGTTGTCATCCCATGCAGCCACCGGGCCATAAATCGCGCATGGACTCCAGCTCTAGCAAACAGCGATGCCCTCGACCCCGCTACACTGTTGTAGCTGAGTCCGAGGCTATGGTTCCCGCTTCCCCTGCCACAGCCCACTTCCATCCGAACTGCAAGGGCGGTCCGTTCATCAACAATTCCAAACTGCCCTGCATGGTGACGGGACCCACCTACCAAACGCTGGCCAAGCTTTGCCTGCAGGAGGTTTTAGCTGCCAGCACGGATACGCAACAGCTCTCAAAGTTGCTGTTTGCCCTGGAAGGAGATGTTCATATCGTGACGGCAGCGGGGAAAAATTTCACAGTAAAAATACCATCGCCAATGCGAATGAAGGATGACGAAAGCCTCGCCCAATTCATCGAAACGCTGTGCACTACATGCCGGGCATGTGCGAATCTCATTTCCTTGGTCCACGAGACGGAGGAGTGCAAGAAGTGCGCCAATAGTCGGAAGCGTCAACTGACTCAGTCAGCCACACCGCCTTCCTCGCCAGTGCTCGCCGACAAGCGAAACCGTCAATCCAACTCGGCAACGACATCACCCTCTGAGAAGATTATCAAGCAGGAATTGGCTGTCAAATCGCCAGTGGAGTCCAAGTCGAAAACTTCGACGAACAATGGCAAGGAGCCTGCAAGCCAGCAAAACAGCAATCACAGTCTCAACAATAACAACAACAGTGCCAGCAAGTCCAGCAACAAGGTGGTCATCAAATCGGAGCCCAACGGAGCGAACGCGCAGACTTCCTCCACAACGCAGGCTCTGCGCAAAGTACGCTTCCAACACCACGCAAACACGAATACGAATAGCTCTGCGACAAACGGAAACCAGGATACGAGCCAGACCACGCACGTATCTACCAGCCATTGCAGCAGCTCGTCAACGTCGTCCAGCACGAGCCTAGCCGGAGGATCGGCGAACACCAGCACAATTGGCAAATACCTGGCACCTCTTGTGGCAGAAGTTCATCCAGAGCAGGCCAATGTAAAGCCCTCGAATAGCTACTACAAGAGTCCGACGACGCTCTCGTCAAGCGCCTCGTTGCCGACATCCGTGTCCACGCCGTTCACGGGCTGCCAGTCAGCCTCGTCCACTGCACTGGCTGCAGGTGGAGTTACAGCGGCTAAGGCGGCCACCGCGCCGGCTGGAGCAGCGGCAACTGCGGGAGCTTCTCCGAGCTACACCGCGATTACCTCACCCGTGAGCACGCCCACTTCTGCTTTGGCAAACTCACATCTGCGGTCGCAGCCGATCGACTGGACCATCGAAGAGGTGATCCAGTACATCGAGAGCAACGACAACTCCCTTGCAGTTCATGGTGATCTCTTCCGAAAGCACGAAATCGATGGTAAAGCTTTATTATTGCTAAATTCAGAGATGATGATGAAGTACATGGGCCTGAAGCTAGGACCAGCCTTAAAAATCTGCAATTTAGTCAATAAGGTCAATGGTCGTCGAAATAATCTGGCACTC

CDS AA Sequence2

MSGGRDSSTSSGSNSAAPGASTNATSSASASASSTSTSASPGSTTSPASTQRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYSKGACTQCDNVIRDGAPNKEFCSIMCMNKHQKKNCSTRHSGGSASGKGLAESERKLLASGAPAPTGPFQYESFHVFDWDAYLEETGSEAAPAKCFKQAQNPPNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPAGWCARSCHPMQPPGHKSRMDSSSSKQRCPRPRYTVVAESEAMVPASPATAHFHPNCKGGPFINNSKLPCMVTGPTYQTLAKLCLQEVLAASTDTQQLSKLLFALEGDVHIVTAAGKNFTVKIPSPMRMKDDESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQLTQSATPPSSPVLADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTSTNNGKEPASQQNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSSTTQALRKVRFQHHANTNTNSSATNGNQDTSQTTHVSTSHCSSSSTSSSTSLAGGSANTSTIGKYLAPLVAEVHPEQANVKPSNSYYKSPTTLSSSASLPTSVSTPFTGCQSASSTALAAGGVTAAKAATAPAGAAATAGASPSYTAITSPVSTPTSALANSHLRSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPALKICNLVNKVNGRRNNLAL

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.