Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Her (FBgn0030899) TF
 
(-0.75/-2.27/0.25)

Factor activity

Additional information

Her [FlyBase] | Her [FlyMine] | Her [BDGP]

H. sapiens orthologues1

None.

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGATGGCACGTCCCGAGGAGCAGAAGTCTCATGTTGGAGCAAAGTCACGATCTCATCAGTATCGAGAGGTTTTTAAGCCAATGATGGAGAGGAAGAGGCGGTCACGCATCAATCGCTGCCTGGACTTTATTAAGGACCTGCTTCAGGAGGTGTCGCATCTGGACGGCGAGACCATGGCCAAAATGGATATGGGAGATGTCCTGGAATTGGCAGTTCACCACCTGAGCAAGAAAAACTGTCCGGTGGCCACGCCCACCACAGCGCCTACATCCGGAGTATATCAGAGCCCAATTGATTGCTATTGGAGTGGCTTTCGAGAATGCGTCCTGGAAGTGTCCCAATTTCTGCAACACAACGGCTATCAGCCGAGTTTCGAATTTGCGAAAGAATTGGATCATCTTGTGGCCTCCACATCCAAATCCAAGCCAAATCTCTGGAGGCCCTGG

CDS AA Sequence2

MMARPEEQKSHVGAKSRSHQYREVFKPMMERKRRSRINRCLDFIKDLLQEVSHLDGETMAKMDMGDVLELAVHHLSKKNCPVATPTTAPTSGVYQSPIDCYWSGFRECVLEVSQFLQHNGYQPSFEFAKELDHLVASTSKSKPNLWRPW

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.