Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
RYBP (FBgn0034763) cofactor
 
(-0.76/-3.94/0.29)

Factor activity

Additional information

RYBP [FlyBase] | RYBP [FlyMine] | RYBP [BDGP]

H. sapiens orthologues1

YAF2 (HGNC:17363, ENSG00000015153), RYBP (HGNC:10480, ENSG00000163602)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGACAAGAAATCCTCGCCGGTGCGACGACAAAAGCGGCAGGCGAAGGTGATCGAGGAGAACTTCTGGGACTGCAGCGTCTGCACATATAGAAACTCGGCGGAGGCCTTCAAGTGTCGCATGTGCGACGTGCGGAAAGGAACCTCCACGCGAAAGCCACGCCTGAACTCAGCGCTAGTCGCCCAGCAGGCCGCCACTTTGCCAGGAGCCAGTGTCAACATGCCCAACGGGAAGTCCGCCTCCGGATCACGGCATGGCAGTGGGCACGACCGGCAGAGGCACAAGCGGTATCCGGCACGGTTGAAAAACGTGGACCGATCGACGGCACAGACGCGAGAGGTGACGGTCAACTCGGTGACCGTGTTCATCACAGAGTACAAGGCCAAGCCGGTGAGCAGCCGACGCGAATCCAGTGAGCAGAGCTTCAGCGAGAGCAACGACAGCCGGAGT

CDS AA Sequence2

MDKKSSPVRRQKRQAKVIEENFWDCSVCTYRNSAEAFKCRMCDVRKGTSTRKPRLNSALVAQQAATLPGASVNMPNGKSASGSRHGSGHDRQRHKRYPARLKNVDRSTAQTREVTVNSVTVFITEYKAKPVSSRRESSEQSFSESNDSRS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.