Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
tgo (FBgn0015014) TF
 
(4.22/-1.05/5.94)

Factor activity

Additional information

tgo [FlyBase] | tgo [FlyMine] | tgo [BDGP]

H. sapiens orthologues1

ARNT (HGNC:700, ENSG00000143437), ARNT2 (HGNC:16876, ENSG00000172379)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGACGAGGCGAACATACAGGACAAGGAGCGGTTCGCCAGCCGCGAGAACCATTGCGAGATTGAACGACGTCGCCGCAACAAGATGACGGCCTACATCACGGAACTCTCGGACATGGTGCCCACCTGCAGTGCCCTGGCCCGCAAACCGGACAAGCTCACCATTCTCCGCATGGCAGTGGCTCACATGAAGGCACTGCGTGGCACAGGAAATACCAGCAGCGATGGCACTTACAAGCCCTCCTTCCTGACCGACCAGGAGCTTAAGCATCTTATCCTGGAGGCGGCCGATGGTTTCCTGTTCGTGGTATCCTGCGACTCGGGCAGGGTGATCTATGTATCGGATTCGGTGACTCCCGTGCTGAACTACACCCAAAGCGATTGGTATGGCACTAGCCTGTATGAGCACATTCATCCCGATGATCGCGAGAAGATCCGCGAGCAATTATCAACCCAGGAATCGCAGAATGCCGGCCGCATCCTGGATCTAAAGTCGGGAACTGTGAAAAAGGAGGGTCACCAGTCCAGCATGCGTTTGAGCATGGGTGCTCGTCGTGGTTTCATCTGTCGCATGCGGGTGGGCAATGTAAACCCGGAGTCCATGGTCTCGGGGCACTTGAATCGTCTCAAGCAACGAAACTCCCTCGGACCTTCAAGGGATGGCACCAACTACGCCGTGGTTCACTGCACGGGTTATATCAAAAACTGGCCGCCCACCGATATGTTCCCCAACATGCACATGGAGCGCGATGTGGACGACATGAGCTCGCACTGCTGCCTGGTGGCCATCGGCCGTCTGCAGGTCACCTCCACGGCAGCCAACGATATGAGTGGATCGAACAATCAGAGTGAGTTCATCACACGTCATGCGATGGATGGCAAGTTCACGTTTGTGGATCAGCGTGTCCTTAACATATTGGGATATACTCCTACTGAGCTGCTGGGGAAGATCTGCTACGATTTCTTTCATCCCGAGGACCAGAGCCACATGAAGGAGAGCTTTGACCAGGTGCTCAAGCAAAAGGGACAGATGTTCTCGCTTTTGTACAGAGCCAGAGCTAAGAATTCGGAGTACGTTTGGCTCCGCACACAGGCCTATGCCTTTCTGAATCCATATACCGACGAAGTGGAATATATAGTGTGCACCAACAGTTCTGGGAAGACCATGCACGGTGCTCCCCTGGATGCGGCGGCTGCTCATACGCCCGAGCAAGTGCAACAACAACAGCAGCAGGAGCAACACGTTTATGTTCAGGCTGCCCCAGGAGTGGACTATGCGCGCCGCGAGTTAACTCCAGTGGGCAGCGCCACGAATGATGGCATGTACCAGACGCACATGCTGGCCATGCAGGCTCCTACGCCCCAACAGCAGCAGCAACAACAGCAACGGCCAGGATCGGCGCAAACCACACCAGTCGGATATACCTACGACACCACACACTCGCCGTACAGTGCTGGCGGACCATCACCGTTGGCTAAGATACCCAAGTCTGGCACCTCACCCACGCCGGTGGCACCCAACTCCTGGGCAGCACTGCGTCCCCAGCAGCAACAACAGCAGCAGCAGCCCGTGACCGAAGGCTATCAGTATCAGCAGACGAGTCCGGCCAGGTCGCCGAGCGGTCCAACCTATACACAATTGAGTGCCGGAAACGGAAATCGCCAGCAAGCGCAGCCAGGAGCATATCAGGCGGGACCACCACCGCCACCCAATGCGCCGGGAATGTGGGACTGGCAGCAGGCTGGAGGACACCCGCATCCGCCGCACCCAACGGCGCATCCGCACCATCCGCACGCTCATCCCGGTGGACCAGCAGGAGCAGGACAGCCACAGGGTCAGGAGTTCTCAGATATGCTGCAGATGTTGGATCACACGCCGACCACGTTTGAGGATCTGAATATCAATATGTTCAGCACGCCGTTCGAG

CDS AA Sequence2

MDEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNTSSDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDVDDMSSHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNSSGKTMHGAPLDAAAAHTPEQVQQQQQQEQHVYVQAAPGVDYARRELTPVGSATNDGMYQTHMLAMQAPTPQQQQQQQQRPGSAQTTPVGYTYDTTHSPYSAGGPSPLAKIPKSGTSPTPVAPNSWAALRPQQQQQQQQPVTEGYQYQQTSPARSPSGPTYTQLSAGNGNRQQAQPGAYQAGPPPPPNAPGMWDWQQAGGHPHPPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDLNINMFSTPFE

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.