Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
hth (FBgn0001235) TF
 
(2.37/-0.07/4.19)

Factor activity

Additional information

hth [FlyBase] | hth [FlyMine] | hth [BDGP]

H. sapiens orthologues1

MEIS2 (HGNC:7001, ENSG00000134138), MEIS1 (HGNC:7000, ENSG00000143995), MEIS3 (HGNC:29537, ENSG00000105419), MEIS3P2 (HGNC:17638, ENSG00000188013)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCTCAGCCCAGGTATGACGATGGCCTACACGGCTACGGCATGGACTCCGGAGCCGCAGCAGCGGCCATGTACGATCCACACGCCGGTCACCGGCCGCCCGGACTGCAGGGCCTCCCCTCGCACCACTCTCCGCACATGACGCACGCAGCGGCGGCGGCGGCCACAGTGGGCATGCACGGCTACCATTCGGGGGCCGGGGGTCATGGAACACCTAGTCATGTATCGCCGGTCGGTAATCACCTAATGGGCGCAATACCCGAAGTACACAAACGTGATAAGGATGCGATTTATGAACATCCGCTATTCCCGCTTTTGGCGCTGATCTTTGAGAAGTGCGAATTGGCCACATGTACGCCGAGGGAGCCCGGTGTGCAAGGTGGCGATGTCTGTTCGTCGGAATCGTTCAACGAGGATATTGCAATGTTCAGTAAACAGATAAGATCACAGAAACCCTATTATACCGCAGATCCCGAAGTCGACTCACTGATGGTGCAAGCAATACAAGTACTTCGGTTTCACCTTTTAGAATTAGAAAAAGTACACGAGTTATGCGATAACTTCTGTCATCGGTATATATCGTGTTTAAAGGGTAAAATGCCAATAGATTTAGTGATCGACGAACGGGACACCACCAAACCACCGGAGTTGGGATCGGCGAACGGAGAAGGGCGCAGCAACGCCGACTCCACATCGCACACCGATGGAGCTAGTACACCAGACGTTGTGAGTACCCCCTTCGCGGGAGCACATGGTCCTATATTGGCGAGCTACAATGCGGTGGTGCACCCATGTTCG

CDS AA Sequence2

MAQPRYDDGLHGYGMDSGAAAAAMYDPHAGHRPPGLQGLPSHHSPHMTHAAAAAATVGMHGYHSGAGGHGTPSHVSPVGNHLMGAIPEVHKRDKDAIYEHPLFPLLALIFEKCELATCTPREPGVQGGDVCSSESFNEDIAMFSKQIRSQKPYYTADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDTTKPPELGSANGEGRSNADSTSHTDGASTPDVVSTPFAGAHGPILASYNAVVHPCS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.