Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Rpn3 (FBgn0261396) cofactor
 
(-0.49/-3.37/0.46)

Factor activity

Additional information

Rpn3 [FlyBase] | Rpn3 [FlyMine] | Rpn3 [BDGP]

H. sapiens orthologues1

PSMD3 (HGNC:9560, ENSG00000108344)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGACCAACGCAACGGACATCGGTGCTAACGACGTGGAGATGGAGGTGGATCCAACGGCGGAGACGCTGGCTGACGAGAAGAAGAACCAAGATGTGGCCGCCGTGCAGGAGATCCGCGAGCAGATTCGTCAGATTGAGAAGGGGGTAGCCTCGAAAGAGTCGCGCTTCATCCTGCGCGTCCTTCGCAATTTGCCCAACACTCGTCGCAAGCTGAACGGCGTCGTCTTCCGGAATCTTGCACAGAGTATTTACCCCGCTGGTGCAGATCGTGAGGCGGCCGTGGCTTTGATGCCCGCTGTGGAGAAAGACGCCACCGAGCTGCCCGATGTTCCCAAAAAACAAGTTGCCACCAAGGCTCCAATCGCCGAGGTCGATGCCTACTTCTACCTGCTCCTGCTGGTCAAGCTCATCGACGCCAGTGATTTAAAGCGGGCCGGAATTAGCGCCGACGCCCTAATGGCCAAAATCTCCATCCAAAACCGACGCACCCTTGATCTGATTGGTGCCAAGTCCTACTTCTATTTTTCAAGAGTGGCGGAGCTAAAAAACTCACTGGAAGGCATACGCTCGTTCCTGCACGCTCGTCTGCGCACCGCTACGCTGCGTAATGATTTTGAAGGCCAGGCGGTGCTTATTAACTGTTTGCTCCGCAACTACTTGCACTATGCTTTGTACGACCAAGCCGACAAGCTGGTAAAGAAATCCGTCTACCCGGAATCGGCCAGCAACAATGAATGGGCGCGTTTCCTGTACTATCTAGGTCGGATTAAGGCCGCTAAGCTGGAGTACAGCGATGCCCACAAGCATCTGGTCCAGGCCCTGCGTAAGTCGCCGCAGCACGCTGCCATCGGCTTTCGTCAGACGGTTCAAAAGCTAATTATCGTTGTGGAGCTGCTTTTGGGCAACATCCCGGAGCGTGTGGTGTTCCGGCAAGCCGGTCTTCGCCAATCTCTTGGTGCCTACTTCCAGCTCACGCAGGCCGTGCGTCTGGGCAACTTGAAGCGCTTCGGCGACGTGGTATCCCAATACGGACCCAAGTTCCAACTGGACCACACATTCACCCTGATTATCCGGCTGCGCCACAATGTGATCAAGACGGCAATCCGCTCCATCGGACTATCGTACTCACGCATCTCGCCGCAAGACATTGCCAAGCGGCTAATGCTAGACTCCGCGGAGGATGCCGAGTTTATTGTATCGAAGGCTATACGGGACGGCGTGATTGAGGCTACGTTGGACCCAGCCCAGAATTTCATGCGCAGCAAGGAAAGTACGGACATCTACAGCACCCGGGAACCGCAGCTGGCCTTTCACGAGCGCATCTCGTTCTGCCTGAACCTGCACAACCAGAGCGTTAAGGCCATGCGCTATCCCCCAAAGTCCTACGGCAAGGATTTGGAGAGCGCCGAGGAGAGACGCGAGCGGGAGCAGCAGGACCTTGAGCTGGCCAAGGAGATGGCCGAGGATGATGAGGATGGTTTC

CDS AA Sequence2

MTNATDIGANDVEMEVDPTAETLADEKKNQDVAAVQEIREQIRQIEKGVASKESRFILRVLRNLPNTRRKLNGVVFRNLAQSIYPAGADREAAVALMPAVEKDATELPDVPKKQVATKAPIAEVDAYFYLLLLVKLIDASDLKRAGISADALMAKISIQNRRTLDLIGAKSYFYFSRVAELKNSLEGIRSFLHARLRTATLRNDFEGQAVLINCLLRNYLHYALYDQADKLVKKSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHKHLVQALRKSPQHAAIGFRQTVQKLIIVVELLLGNIPERVVFRQAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQYGPKFQLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAEDAEFIVSKAIRDGVIEATLDPAQNFMRSKESTDIYSTREPQLAFHERISFCLNLHNQSVKAMRYPPKSYGKDLESAEERREREQQDLELAKEMAEDDEDGF

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.