Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
Eip78C (FBgn0004865) TF
 
(4.34/0.81/5.56)

Factor activity

Additional information

Eip78C [FlyBase] | Eip78C [FlyMine] | Eip78C [BDGP]

H. sapiens orthologues1

NR1D1 (HGNC:7962, ENSG00000126368), NR1D2 (HGNC:7963, ENSG00000174738)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGATGTATACCAAATAGAGCTGGAGGAACAGGCACAAATCCGCTCCAAACTGCTGGTCGAAACCTGTGTGAAGCACTCGTCTTCGGAGCAGCAGCAGCTCCAAGTTAAGCAGGAGGACCTCATCAAGGATTTCACTCGGGACGAGGAGGAACAGCCAAGCGAAGAGGAGGCGGAGGAAGAGGACAACGAAGAGGACGAGGAAGAAGAAGGCGAAGAAGAAGAGGAGGACGAGGACGAGGAAGCCCTGCTGCCGGTAGTCAATTTTAATGCAAATTCAGACTTTAATTTGCATTTCTTTGACACACCGGAGGACTCGTCCACCCAAGGGGCCTACAGTGAGGCCAATAGCTTGGAATCCGAGCAGGAAGAGGAGAAGCAAACACAGCAGCATCAGCAGCAGAAGCAGCATCACCGGGATTTGGAGGATTGCCTAAGTGCCATTGAAGCTGATCCATTGCAGTTGTTGCATTGCGACGACTTCTATAGAACATCAGCCCTAGCAGAGAGTGTTGCAGCCAGTCTAAGCCCACAGCAGCAGCAGCAACGGCAGCACACCCACCAGCAACAACAGCAACAGCAGCAGCAGCAGCAACACCCTGGACAGCAGCAACATCAGCTCAACTGCACGCTGAGCAATGGTGGAGGTGCTTTGTACACCATCAGCAGTGTGCATCAGTTCGGTCCGGCCAGCAACCACAACACCAGCAGCAGCTCCCCCTCCTCCAGCGCCGCCCACTCTTCGCCGGACAGCGGCTGCTCGTCGGCCTCCTCCTCCGGATCTTCGCGATCCTGCGGATCCTCCTCTGCATCCTCCTCCTCGTCAGCGGTCAGCAGCACCATCAGCAGCGGCCGCAGCAGCAACAACAGCGTCGTCAACCCCGCAGCAACATCTTCATCTGTTGCGCATCTGAACAAAGAGCAACAGCAGCAGCCACTGCCGACGACACAGCTGCAACAGCAGCAGCAGCACCAGCAGCAGTTGCAACACCCGCAGCAGCAGCAATCTTTTGGCCTAGCAGACAGCAGCAGCAGCAACGGCAGCAGCAACAACAACAACGGTGTCTCCTCGAAATCATTTGTGCCCTGCAAAGTCTGTGGCGACAAGGCATCGGGATACCACTATGGTGTAACCTCCTGCGAGGGTTGCAAGGGATTCTTTCGTCGCAGTATCCAGAAGCAAATCGAATATCGCTGTTTGCGGGACGGCAAGTGCCTGGTCATCAGACTGAACCGCAATCGCTGCCAGTACTGCCGCTTCAAGAAATGCCTTTCCGCTGGCATGAGCCGCGATTCCGTACGTTATGGTCGCGTTCCCAAGCGTTCCCGTGAGCTGAACGGAGCGGCCGCCTCCTCCGCCGCCGCTGGAGCTCCTGCCTCCCTCAATGTGGATGACTCTACCAGCAGCACACTGCACCCGAGTCACCTACAGCAGCAGCAGCAACAGCATCTACTACAGCAGCAACAGCAGCAGCAACATCAGCCACAGCTGCAGCAACACCACCAACTGCAACAGCAGCCGCATGTAAGCGGCGTACGTGTGAAGACCCCGAGTACTCCACAAACGCCACAAATGTGTTCGATCGCCTCCTCGCCATCGGAGCTGGGCGGTTGCAATAGTGCCAATAACAATAACAATAATAACAACAACAGTAGCAGCGGTAATGCCAGCGGTGGCAGCGGCGTGAGCGTCGGCGTTGTTGTTGTGGGCGGACACCAGCAACTGGTGGGAGGCAGCATGGTGGGAATGGCGGGCATGGGCACGGATGCCCACCAGGTGGGCATGTGTCACGACGGCTTGGCGGGAACGGCAAACGAGCTGACCGTCTACGATGTCATCATGTGCGTGTCGCAGGCGCACCGCCTCAACTGCTCCTACACGGAGGAACTGACCAGAGAGCTCATGCGTCGTCCCGTGACGGTGCCACAAAATGGGATTGCCAGCACAGTGGCCGAGAGTCTGGAGTTCCAGAAGATCTGGCTGTGGCAACAGTTCTCGGCCAGGGTGACGCCTGGCGTTCAGCGGATTGTGGAGTTTGCGAAACGCGTACCTGGCTTCTGTGATTTCACCCAAGATGACCAGCTTATACTAATAAAGCTGGGCTTCTTCGAGGTCTGGTTGACCCATGTGGCCCGGTTGATCAATGAGGCGACATTGACACTGGACGATGGTGCCTACCTGACGCGCCAGCAGCTTGAGATACTCTACGATTCTGACTTTGTCAACGCCTTGCTGAACTTTGCCAACACGCTGAACGCCTACGGGCTGAGTGACACCGAAATCGGACTCTTCTCGGCCATGGTGCTGCTTGCCTCGGATCGAGCTGGACTCAGCGAGCCCAAGGTGATCGGCAGGGCCAGGGAACTGGTGGCCGAGGCGCTGCGCGTACAGATCCTGCGTTCGCGGGCAGGATCCCCACAGGCGCTGCAGCTGATGCCGGCGCTGGAAGCCAAGATACCCGAGCTGAGATCCTTGGGGGCCAAGCACTTCTCACACCTAGACTGGCTACGGATGAACTGGACCAAGCTGCGCCTGCCGCCCCTCTTCGCCGAGATCTTCGACATCCCGAAGGCTGACGATGAGCTG

CDS AA Sequence2

MDVYQIELEEQAQIRSKLLVETCVKHSSSEQQQLQVKQEDLIKDFTRDEEEQPSEEEAEEEDNEEDEEEEGEEEEEDEDEEALLPVVNFNANSDFNLHFFDTPEDSSTQGAYSEANSLESEQEEEKQTQQHQQQKQHHRDLEDCLSAIEADPLQLLHCDDFYRTSALAESVAASLSPQQQQQRQHTHQQQQQQQQQQQHPGQQQHQLNCTLSNGGGALYTISSVHQFGPASNHNTSSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAHLNKEQQQQPLPTTQLQQQQQHQQQLQHPQQQQSFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQQQQHQPQLQQHHQLQQQPHVSGVRVKTPSTPQTPQMCSIASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVGGHQQLVGGSMVGMAGMGTDAHQVGMCHDGLAGTANELTVYDVIMCVSQAHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVARLINEATLTLDDGAYLTRQQLEILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIGRARELVAEALRVQILRSRAGSPQALQLMPALEAKIPELRSLGAKHFSHLDWLRMNWTKLRLPPLFAEIFDIPKADDEL

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.