Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
RpI12 (FBgn0038903) cofactor
 
(0.21/-0.30/1.40)

Factor activity

Additional information

RpI12 [FlyBase] | RpI12 [FlyMine] | RpI12 [BDGP]

H. sapiens orthologues1

ZNRD1 (HGNC:13182, ENSG00000066379)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGATATTTTTTCCAATTGTCCGGGCTTTTGCCCCTCCTGCGGCTCCATTCTGCCCGAGCTTCAAGTCAAGGGCAATGTGATTTGCTACAACTGCAAGAAGGAGTTTCAGCCAGATGTTTACAGCGGCGAGAAGTCCGAGTTTACCATACACTTCAACACCTACGATCCCAGCAAGGTGTTCAACAGGACGAAAAGGGAGTCGGAATCGGACGCGGATGGCCCCGTTGTGGAGAGGAAGTGTCCCAAGTGCAACCACGACAAGATGTCCTATGCCACCCTGCAGCTTCGATCGGCGGACGAAGGCCAGACGGTGTTCTTTACCTGCCTTAAGTGCAAATTCAAAGAATCCGAAAACTCT

CDS AA Sequence2

MDIFSNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTIHFNTYDPSKVFNRTKRESESDADGPVVERKCPKCNHDKMSYATLQLRSADEGQTVFFTCLKCKFKESENS

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.