Factors @ Stark Lab

Gene Name Type Activity (log2) in S2 cells
(avg/min/max)
Cluster Data available
S2Kc167BG3OSCHeLa
gem (FBgn0050011) TF
 
(-0.45/-2.91/0.79)

Factor activity

Additional information

gem [FlyBase] | gem [FlyMine] | gem [BDGP]

H. sapiens orthologues1

UBP1 (HGNC:12507, ENSG00000153560), TFCP2 (HGNC:11748, ENSG00000135457), TFCP2L1 (HGNC:17925, ENSG00000115112)

Functionally similar transcription factors and cofactors

CDS DNA Sequence2

ATGGCGCTTTCGTTTCTATCCCAAAACTCCGGTCTGTTGGATTTACAAAGCATATTCGATCCACAATATACTCATCATCAACAACAACAACAACAACTACTACATTTGAGCCACCACCCTCAACATCACATTCAACAACACCAAAATCAACAACTACAACAACAAGCGGAGCAAATTCAACAACATCAACAAGAACGCACCCTTTCAACAAAGTTCGATTTGAACCTGTTCAACGAACTCGACCAAATGGAATTCAACAATTTAAATCGCAGTCAATATCAGAATAATAATAATAACAACAGTATCAGCAATAATCAAAACTCCAACAACAATACCAACACCACTAACGGTATCAGTGAAAATCTAAATCAGATCCAAAACCGCCACTTCATCAGCGGCTACCACCATCAGCATATTGGATCGGACTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCAGAGGAATCGTGGACAGACGGACAGTCGAAGGACTCGCCGGGACCGCAGATCATCGACGTGCAGACCATTTACCTGAACAGCGGCTCACGCAAAAGACGAATGGATTGGGACTCTTTGGACATTGGCCAAAGTGAGAACTCACCCACAGCATCGCAGAGCGGCGACTTGCCCTCCAAAGTGGCCCATCAGGAGAAGGAAAAGCACAAGCGCGAGAAGCACTCGGGTCGCAGCAGCTGGAGCGATGATATCGGCTTCGATCTGAACGCCGAGTTTAACAGCAACTCATATTTGAACAATGAGAACTTCCTGTCGTTCTCGCCCACGCTGACCACCCTGAAGCAGGAGCCCCAGACGGATCAGATCAAGCCGAGCCCCAAGGTATCCCTGGATAATGCCTCCGCATCGCCCTCCATCGCCATTGCCAAGTTGGATGAGGTCCAGAACTCGCCGTCGCAGGCTATTTCTGGCCAAGACTCGGCTAACGGATCGGGATCGGCCGCAAACGGCAAGCATGATGTAAACTCCGGACTCGCCTGCGGGTGTGGCTCTCCTCAGGGTTCACCACTAGCCAACGCCGAGTATGAGTTGAACGAAAAGGGAAAGCCCCAGCAACTTAGCGTTTTGGATCCTGCTAAAATCGAGATCGGTTCGGCCAACGGAGCTACCCATGCCGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACTTCGATCGCCACCAAGAACAATGAGGAGACTTTGACGTACCTCAACCAAGGCCAGAGCTACGAAATAAAGCTGAAGAAGATCGGAGACCTGTCCCTCTATAGGGATAAGATACTGAAGAGCGTGATCAAGATCTGTTTCCACGAGCGCCGCCTGCAGTTCATGGAGCGCGAACAGATGCAGCAATGGCAGCAATCCCGCCCAGGCGAACGCATCATTGAGGTGGACGTACCGCTTTCGTACGGCCTCTGCCACGTGTCGCAGCCGTTGAGCTCCGGCTCACTGAACACTGTCGAGATCTTCTGGGACCCACTGAAGGAGGTCGGCGTCTACATCAAGGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGCGAGAAGGGTGTGCCCTTCCGACTGCAAATTGAAACCTATATAGAAAACACAAACAGTGCCACCGCCAGCGGCTCGGGCGGCAGCAACAACAGCGCCATCGCCAGTGGCAGCGGAAGCAGTGGCTCCGCTGCACCAGCATCTCCGGAACGGACACCCAGTGCCGGCAGCAATGGTAAACAGGCGGTCCACGCAGCTGCCTGCCAGATCAAGGTTTTTAAGCTAAAAGGAGCTGATCGCAAACATAAACAGGATCGGGAGAAGATCCAGAAGCGACCGCAATCGGAGCAGGAGAAGTTCCAGCCCAGCTACGAGTGTACCATCATGAACGATATATCCCTGGACCTGGTGATGTCCGCCACCACAACCGGCTGCTACAGTCCCGAATATATGAAACTTTGGCCAAACTCGCCCGTGCACATACCCAAGTACGATGGAATGCTTCCGTTTGCGCCAAGTGCAGCATCGCCGGCTACCAGCAGCAGCCCCATAGCCATCAACTCGGTGACATCGACCAACTCGCCCACCCTCAAGCTGATGGACGCCACAAACATGGTCTCACCGCAGCATGTGCCCGCTGACATGGACGATTATAGCCAGAACATAATGCCGGAATCGACGCCCTCGCAAGTGACGCAGTGGCTGACCAATCATCGCCTCACGGCCTATCTTTCAACGTTTGCACAGTTCTCGGGAGCGGATATCATGCGCATGTCCAAGGAGGATTTGATTCAAATTTGCGGCCTGGCCGATGGCATTCGCATGTTCAACATTTTGCGCGCCAAAACTATTGCTCCCAGGCTAACGTTGTACGCCAGCGTGGATGGATGCAGCTACAATGCCATCTACTTGTTGTCGAACACGGCCAAGGAGCTGCAGCAGAAGCTTTTCAAGATGCCCGGCTTCTACGAGTTCATGGCCAAGGCCAGTGCCCAGGAGAACGGAGCCGGTGGAGCAGCCACTGCAGCTGCTGCAGCACTCTTCAACAATTGGGGGATGCACTCCAAGTATTCGGGCAGCGGCTCCAATATCTTCAACGACGCCAACAAGAGCTGCGTGTACATATCGGGGCCATCGGGCATCCTTGTGACCATCACCGACGAGGTGCTGAACAACGAGATCAAGGACGGCAGCCTCTACGCGCTGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAAC

CDS AA Sequence2

MALSFLSQNSGLLDLQSIFDPQYTHHQQQQQQLLHLSHHPQHHIQQHQNQQLQQQAEQIQQHQQERTLSTKFDLNLFNELDQMEFNNLNRSQYQNNNNNNSISNNQNSNNNTNTTNGISENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDGQSKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQSENSPTASQSGDLPSKVAHQEKEKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLTTLKQEPQTDQIKPSPKVSLDNASASPSIAIAKLDEVQNSPSQAISGQDSANGSGSAANGKHDVNSGLACGCGSPQGSPLANAEYELNEKGKPQQLSVLDPAKIEIGSANGATHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSGSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSATASGSGGSNNSAIASGSGSSGSAAPASPERTPSAGSNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVMSATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFAPSAASPATSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYSQNIMPESTPSQVTQWLTNHRLTAYLSTFAQFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASVDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGAGGAATAAAAALFNNWGMHSKYSGSGSNIFNDANKSCVYISGPSGILVTITDEVLNNEIKDGSLYALEVQAGKVILKLINKQDNN

1   H. sapiens orthologs were obtained from InParanoid8, in particular D.melanogaster-H.sapiens.orthoXML.
2   Genomic sequences of the transcription factors were obtained from the dm3/BDGP Release 5 genome assembly. In the case of cofactors, the genomic sequences stand for our results obtained by deep sequencing.